BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15984 (UTR included)
(1522 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01047B2H03 165 3e-40
BF01060B1D11 141 4e-33
BF14_335_C2 100 1e-20
BF01055B2A04 92 3e-18
BF01031B2E06 72 3e-12
>BF01047B2H03
Length = 758
Score = 165 bits (83), Expect = 3e-40
Identities = 238/286 (83%), Gaps = 9/286 (3%)
Strand = Plus / Minus
Query: 99 ctctataaacacctaagagtttccaaaagacatatcctggggaaatcccaggatgacgtt 158
|||||||||||| ||||||||||||| |||||||||| ||||||| |||| |||| ||
Sbjct: 733 ctctataaacacttaagagtttccaagagacatatcccggggaaagcccataatgatgtc 674
Query: 159 attacataactcccaaaagacaatgatgtcc------tagagatcgagacttcaattcca 212
||||||| |||| ||||| | | |||| || || || || ||||||||||||||
Sbjct: 673 attacatcactctcaaaaaatagagatgcccctgaactaaag-tcaagacttcaattcca 615
Query: 213 cgaacagtttatgataggcgcacaaagtaat-agagtagagttagtatcaagtaggaagg 271
|||||||||||||||| ||||||||||| ||||||| |||| |||||| | |||||
Sbjct: 614 taaacagtttatgataggagcacaaagtaacgagagtaggattaggatcaaggaagaagg 555
Query: 272 ccaaagatacggatatattaaagacctttattcggcaagacgagaattctaaatataaga 331
|| |||||||||||||||| ||| | ||||||||||||||||||||| | |||||| |
Sbjct: 554 cccaagatacggatatattgaagtcttttattcggcaagacgagaatgatggatataaca 495
Query: 332 tccatgcaatgagttt-gaaatgcagaatgagtggctacacataga 376
|||||||||||||||| || |||||||| |||||| || |||||||
Sbjct: 494 tccatgcaatgagtttagatatgcagaacgagtggttagacataga 449
Score = 153 bits (77), Expect = 1e-36
Identities = 292/357 (81%), Gaps = 5/357 (1%)
Strand = Plus / Minus
Query: 516 atctgcggggaggcagttggaactgctgagcatttgctggtgggatgtagggtactccta 575
||||||| |||||||||||||| |||||||||||||||| ||||||||||| |||||||
Sbjct: 355 atctgcgaggaggcagttggaattgctgagcatttgctgatgggatgtaggctactcctg 296
Query: 576 gatagaggtcagtact-cgcgtcgccacgatagggttttagaaatcatacgtgaagcggg 634
||||| ||||| |||| | ||| ||| |||||||||||| | |||||| ||||||||
Sbjct: 295 gatagcggtcaatactaccggtctccatgatagggttttaaatttcatacatgaagcggt 236
Query: 635 tattctatcggtag-cagggacgcaaaaagaaataagcacaaaccaacggtcaataggtt 693
|| | | | ||||| || | || |||||||||||| ||||||| || | ||| ||||
Sbjct: 235 tagtattttggtagtcattg-cggaaaaagaaataaccacaaacgggcgattaattggtt 177
Query: 694 tagtgagagaaagcactagggctacaaaatcaagcgtcaagccttactctattataaaag 753
| ||||||||| || |||||||| ||| |||| | |||||||||||||||| | ||||
Sbjct: 176 ttgtgagagaagacattagggctataaagtcaaacatcaagccttactctatccttaaag 117
Query: 754 cggcttcggcttggactttaatgatggacacgtatgagaagcaatataaaatcccagagg 813
||| ||||| ||| ||| |||| ||||| ||||||| | | | ||| |||||||| |||
Sbjct: 116 cggtttcggattgcactataatcatggatacgtatggggaacgatacaaaatccccgagc 57
Query: 814 atatttgtgcgtcggcctccagaccagacatagttt-tatatttgagaattttaaag 869
||| ||||| ||||| ||||||||||||||| ||| |||||| | |||||||||||
Sbjct: 56 ata-ttgtgtgtcggtttccagaccagacatattttatatattcgcgaattttaaag 1
>BF01060B1D11
Length = 799
Score = 141 bits (71), Expect = 4e-33
Identities = 234/286 (81%), Gaps = 8/286 (2%)
Strand = Plus / Minus
Query: 99 ctctataaacacctaagagtttccaaaagacatatcctggggaaatcccaggatgacgtt 158
|||||||||||| ||||||||||||| |||||||||| ||||||| |||| |||| ||
Sbjct: 562 ctctataaacacttaagagtttccaagagacatatcccggggaaagcccataatgatgtc 503
Query: 159 attacataactcccaaaagacaatgatgtcctagagatc------gagacttcaattcca 212
||||||| |||||||||| | |||| || ||| | |||||||||||||||
Sbjct: 502 attacatcactcccaaaaaccggagatggcccagaactaaagtctgagacttcaattcca 443
Query: 213 cgaacagtttatgataggcgcacaaagtaa-tagagtagagttagtatcaagtaggaagg 271
| |||||||||||||||| ||||||||||| ||||||| |||| |||||| | |||||
Sbjct: 442 caaacagtttatgataggagcacaaagtaacgagagtaggattaggatcaaggaagaagg 383
Query: 272 ccaaagatacggatatattaaagacctttattcggcaagacgagaattctaaatataaga 331
| |||||| ||||||||| ||| ||||||| ||||||||||||| | ||||||||
Sbjct: 382 ctcaagatatggatatattgaagtattttattcagcaagacgagaatgatggatataaga 323
Query: 332 tccatgcaatgagttt-gaaatgcagaatgagtggctacacataga 376
||||||||||| |||| || |||||||| |||||| || |||||||
Sbjct: 322 tccatgcaatgcgtttagagatgcagaacgagtggttagacataga 277
>BF14_335_C2
Length = 1827
Score = 99.6 bits (50), Expect = 1e-20
Identities = 89/102 (87%)
Strand = Plus / Minus
Query: 859 gaattttaaagcgcgttgtactaatagagctcacggttccttgggaaaccaacatccgca 918
||||||||||||||| | |||||||||| |||||||||||| | |||||||||| ||
Sbjct: 1259 gaattttaaagcgcgctacgctaatagagcctacggttccttggaagaccaacatcccca 1200
Query: 919 aagaccatgacatcaaggtcaacaagtattacaagctcacta 960
|| |||||| ||||||||||||||||||||| |||||||||
Sbjct: 1199 aaaaccatgccatcaaggtcaacaagtattatgagctcacta 1158
>BF01055B2A04
Length = 830
Score = 91.7 bits (46), Expect = 3e-18
Identities = 111/132 (84%), Gaps = 3/132 (2%)
Strand = Plus / Minus
Query: 860 aattttaaagcgcgttgtactaatagagctcacggttccttgggaaaccaacatccgcaa 919
|||||| |||| |||||| |||||||||| ||| |||| ||| |||||||||||| |||
Sbjct: 563 aatttttaagctcgttgttttaatagagcttacgattccctggaaaaccaacatccccaa 504
Query: 920 agaccatgacatcaaggtcaacaagtattacaagctcactaacgaactcactaagaatat 979
||||| || || | ||||||| ||| ||||||||||||||||||||||||| |||||
Sbjct: 503 agaccgtgccaccgaggtcaataag---tacaagctcactaacgaactcactaggaatag 447
Query: 980 gttcgttgtaaa 991
||||| |||||
Sbjct: 446 attcgtcgtaaa 435
>BF01031B2E06
Length = 707
Score = 71.9 bits (36), Expect = 3e-12
Identities = 55/60 (91%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 903 gaaaccaacatccgcaaagaccatgacatcaaggtcaacaagtattac-aagctcactaa 961
||||||||||||| ||||||||||| ||||||| |||| ||||||||| |||||||||||
Sbjct: 436 gaaaccaacatccccaaagaccatgccatcaagatcaataagtattacgaagctcactaa 495
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 153,397
Number of extensions: 2412
Number of successful extensions: 2412
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 2405
Number of HSP's successfully gapped: 9
Length of query: 1522
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1505
Effective length of database: 8,119,229
Effective search space: 12219439645
Effective search space used: 12219439645
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)