BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15998 (UTR included)
(8020 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01056A1C12 206 4e-52
>BF01056A1C12
Length = 724
Score = 206 bits (104), Expect = 4e-52
Identities = 111/112 (99%), Gaps = 1/112 (0%)
Strand = Plus / Plus
Query: 7910 accctcgcgcacatgccggggaggtgtgtgcc-gaacattataaattaatgattattgtt 7968
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 accctcgcgcacatgccggggaggtgtgtgcccgaacattataaattaatgattattgtt 60
Query: 7969 aaattacccaaagagacatctatataagttatgtcagaattagtgcaatcat 8020
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaattacccaaagagacatctatataagttatgtcagaattagtgcaatcat 112
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 84,583
Number of extensions: 9286
Number of successful extensions: 9286
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9285
Number of HSP's successfully gapped: 1
Length of query: 8020
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 8002
Effective length of database: 8,109,745
Effective search space: 64894179490
Effective search space used: 64894179490
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)