BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16006 (UTR included)
(1558 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01037B2H03 242 1e-63
>BF01037B2H03
Length = 830
Score = 242 bits (122), Expect = 1e-63
Identities = 167/182 (91%)
Strand = Plus / Minus
Query: 888 catccacaagaagtccattcatatcaaggcggcactattgtggtatgggctggtattcgt 947
||||||||||||| |||||||||||||||| ||| |||| ||||||||||||||||||||
Sbjct: 182 catccacaagaagcccattcatatcaaggcagcattattatggtatgggctggtattcgt 123
Query: 948 atcggtgcgcgaaccgatctcatttggataaaagggaacatgaatgcagtgaaataccac 1007
|||||||||||||||||||| |||||||||| ||||||||| |||||| ||||||||| |
Sbjct: 122 atcggtgcgcgaaccgatctgatttggataagagggaacataaatgcactgaaataccgc 63
Query: 1008 aatgacctagtggaacctgtgattatcccgcacagggtacaaaggggttaggagtaccaa 1067
||||| |||||||||||||||||||||| ||||||||||||| |||| |||||| ||||
Sbjct: 62 aatgaggtagtggaacctgtgattatcccacacagggtacaaatgggtcaggagttccaa 3
Query: 1068 ct 1069
||
Sbjct: 2 ct 1
Score = 157 bits (79), Expect = 6e-38
Identities = 193/227 (85%), Gaps = 8/227 (3%)
Strand = Plus / Minus
Query: 188 atattacatgaaagacttcttgatttaaaaactatttactgtata-aaaaaactttgtat 246
||||||| ||||||| ||||| | ||||||||| |||| | |||| |||||| ||| |||
Sbjct: 508 atattacgtgaaagatttcttaacttaaaaactttttaatatatacaaaaaagtttatat 449
Query: 247 gtaaaatattttcttctccaccacttctctccaaattcaaaaaaataaaaatgaaaaact 306
||||||||||| |||||||| |||||| |||||||||||||||||||||| || |
Sbjct: 448 ataaaatattttattctccac-acttctttccaaattcaaaaaaataaaaa-----aaat 395
Query: 307 ctttttgaaacaaaaggatatcggtat-tggaatttggacgttgcaaagttagttcatgt 365
| |||| ||||||||| || |||||| | |||||||| ||| | |||||||||||||||
Sbjct: 394 cattttaaaacaaaagaatgtcggtaactcgaatttggccgtcgaaaagttagttcatgt 335
Query: 366 tacaataaaacagtgaatttctgaaaaattacaagtgattacacatt 412
|| |||||||||||||| ||||||||||||| ||||||| |||||||
Sbjct: 334 taaaataaaacagtgaagttctgaaaaattaaaagtgataacacatt 288
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 226,875
Number of extensions: 9803
Number of successful extensions: 9803
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9801
Number of HSP's successfully gapped: 2
Length of query: 1558
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1541
Effective length of database: 8,119,229
Effective search space: 12511731889
Effective search space used: 12511731889
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)