BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16008 (UTR included)
(3112 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01024B2F06 1189 0.0
BF01012A2F10 70 2e-11
BF14_1706_C1 70 2e-11
BF01060A1A06 68 9e-11
BF01040A1G09 68 9e-11
BF01033A1F05 68 9e-11
BF01029B1B06 68 9e-11
>BF01024B2F06
Length = 758
Score = 1189 bits (600), Expect = 0.0
Identities = 633/645 (98%)
Strand = Plus / Plus
Query: 490 gtggaggcaggatgaatgactcgcctatagtgagggtggcgcaggggcagcttcagggac 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 gtggaggcaggatgaatgactcgcctatagtgagggtggcgcaggggcagcttcagggac 173
Query: 550 gactggctagctcacccaccggaagagccttttatagtttccaaggtataccatacgcga 609
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 174 gactggctagctcacccaccggaagagccttctatagcttccaaggtataccatacgcga 233
Query: 610 agccacccatcggttctttgagattcaaggcgccccaacctccggagtcatgggagggaa 669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 agccacccatcggttctttgagattcaaggcgccccaacctccggagtcatgggagggaa 293
Query: 670 tccgggacgctacttcagaaggcaacgtctgcgctcagatggacctgtatagtcaaaacc 729
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 tccgggatgctacttcagaaggcaacgtctgcgctcagatggacctgtatagtcaaaacc 353
Query: 730 agtatacaggagatgagaactgcttgttccttaacgtgtacactcccagcattgacgggg 789
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 354 agtatacaggagatgagaactgtttgttccttaacgtgtacactcccagcattgacgggg 413
Query: 790 aattactcccagtcatgatctatatacacggtggctacttcgcttacggttcgggaaatt 849
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 414 aattactcccagtcatgatctatatacacggtggctacttcgcttacggttcaggaaatt 473
Query: 850 caaatcagcacggcgcggattatctggtcgagaaagacgttgtggtcgtcacaatcaatt 909
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 474 caaatcagcacggcgcggattatctggtcgagaaagacgttgtggtggtcacaatcaatt 533
Query: 910 atagatgtggggcgttaggtttcctaagcttgaacactccagaggtgccaggaaatgccg 969
|||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 534 atagatgtggggcgttgggtttcctaagcttgaacactccagaggtgccgggaaatgccg 593
Query: 970 gcttgaaagatatggtccaagctattagatggatcaaagaaaacatcaaaagctttggcg 1029
||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 594 gcttgaaagatatggtccaagctattagatggatcnnngaaaacatcaaaagttttggcg 653
Query: 1030 ggaacgctgaaaatttaacagttttcggcaacagcgctggcggtgcgagcacaactttac 1089
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 ggaacgctgaaaatttaacagttttcggcaacagcgctggcggtgcgagcacaactttac 713
Query: 1090 tcacagccagcccgctgtcgaaaaacctcttcggcaaagcaatct 1134
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 tcacagccagcccgctgtcgaaaaacctcttcggcaaagcaatct 758
>BF01012A2F10
Length = 722
Score = 69.9 bits (35), Expect = 2e-11
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 17 gtgtatatatatatatatatatatatatatatata 51
|||||||||||||||||||||||||||||||||||
Sbjct: 468 gtgtatatatatatatatatatatatatatatata 434
Score = 67.9 bits (34), Expect = 9e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 20 tatatatatatatatatatatatatatatataca 53
||||||||||||||||||||||||||||||||||
Sbjct: 434 tatatatatatatatatatatatatatatataca 467
>BF14_1706_C1
Length = 820
Score = 69.9 bits (35), Expect = 2e-11
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 20 tatatatatatatatatatatatatatatatacaatgttatat-tatgtatatatatata 78
|||||||||||||||||||||||||||||||| | ||||| ||| ||||||||||||
Sbjct: 700 tatatatatatatatatatatatatatatatatatnnntatatatatatatatatatata 759
Query: 79 tata 82
||||
Sbjct: 760 tata 763
>BF01060A1A06
Length = 737
Score = 67.9 bits (34), Expect = 9e-11
Identities = 59/65 (90%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 20 tatatatatatatatatatatatatatatataca-atgttata-ttatgtatatatatat 77
|||||||||||||||||||||||||||||||| | || ||||| ||| |||||||||||
Sbjct: 665 tatatatatatatatatatatatatatatatatatatattatanntatatatatatatat 724
Query: 78 atata 82
|||||
Sbjct: 725 atata 729
>BF01040A1G09
Length = 753
Score = 67.9 bits (34), Expect = 9e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 18 tgtatatatatatatatatatatatatatatata 51
||||||||||||||||||||||||||||||||||
Sbjct: 596 tgtatatatatatatatatatatatatatatata 629
Score = 67.9 bits (34), Expect = 9e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 20 tatatatatatatatatatatatatatatataca 53
||||||||||||||||||||||||||||||||||
Sbjct: 629 tatatatatatatatatatatatatatatataca 596
>BF01033A1F05
Length = 770
Score = 67.9 bits (34), Expect = 9e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 18 tgtatatatatatatatatatatatatatatata 51
||||||||||||||||||||||||||||||||||
Sbjct: 505 tgtatatatatatatatatatatatatatatata 538
Score = 67.9 bits (34), Expect = 9e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 20 tatatatatatatatatatatatatatatataca 53
||||||||||||||||||||||||||||||||||
Sbjct: 538 tatatatatatatatatatatatatatatataca 505
>BF01029B1B06
Length = 765
Score = 67.9 bits (34), Expect = 9e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 18 tgtatatatatatatatatatatatatatatata 51
||||||||||||||||||||||||||||||||||
Sbjct: 716 tgtatatatatatatatatatatatatatatata 749
Score = 67.9 bits (34), Expect = 9e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 20 tatatatatatatatatatatatatatatataca 53
||||||||||||||||||||||||||||||||||
Sbjct: 749 tatatatatatatatatatatatatatatataca 716
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 426,828
Number of extensions: 29853
Number of successful extensions: 29853
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 29731
Number of HSP's successfully gapped: 11
Length of query: 3112
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3094
Effective length of database: 8,109,745
Effective search space: 25091551030
Effective search space used: 25091551030
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)