BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16020 (UTR included)
(1444 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1118_C1 963 0.0
>BF14_1118_C1
Length = 519
Score = 963 bits (486), Expect = 0.0
Identities = 486/486 (100%)
Strand = Plus / Plus
Query: 491 gttgccaaaaatggcagttgcgaagaaacccgtggctaagaaagcccaacttaaccaaaa 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 gttgccaaaaatggcagttgcgaagaaacccgtggctaagaaagcccaacttaaccaaaa 65
Query: 551 gagtggtaaaaaaggcgtcaagggtagcaaaatccgcggcaagggacagagaaggaaaat 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 gagtggtaaaaaaggcgtcaagggtagcaaaatccgcggcaagggacagagaaggaaaat 125
Query: 611 cagtcttaagtttgccattgactgcacgcaccctgccgaagacagcatcttggaagtagc 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 cagtcttaagtttgccattgactgcacgcaccctgccgaagacagcatcttggaagtagc 185
Query: 671 caacttcgagaagtacctcaaagaacgtgttaaggttgagggaaaaacaaataacctagg 730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 caacttcgagaagtacctcaaagaacgtgttaaggttgagggaaaaacaaataacctagg 245
Query: 731 caatcacgttgtcatcgcgagggataagacaaaaattatcatcaatgcagacattccctt 790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 caatcacgttgtcatcgcgagggataagacaaaaattatcatcaatgcagacattccctt 305
Query: 791 ctccaagaggtacctgaaatacttgacaaaacgttacctcaagaagaacaacctccgtga 850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 ctccaagaggtacctgaaatacttgacaaaacgttacctcaagaagaacaacctccgtga 365
Query: 851 ctggttgcgagtggttgcttcggctcatgattcctacgagctccgttacttcaacatcaa 910
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 ctggttgcgagtggttgcttcggctcatgattcctacgagctccgttacttcaacatcaa 425
Query: 911 cgctgacagtgacaatgaagacaatgaggattaacctggtgttaataaaatagttttaca 970
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 cgctgacagtgacaatgaagacaatgaggattaacctggtgttaataaaatagttttaca 485
Query: 971 ctaaaa 976
||||||
Sbjct: 486 ctaaaa 491
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 257,478
Number of extensions: 7237
Number of successful extensions: 7237
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7237
Number of HSP's successfully gapped: 1
Length of query: 1444
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1427
Effective length of database: 8,119,229
Effective search space: 11586139783
Effective search space used: 11586139783
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)