BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16031 (UTR included)
(3370 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1H08 149 3e-35
BF14_335_C4 105 5e-22
BF14_335_C2 100 3e-20
BF01049B1F01 84 2e-15
BF01016A2B02 72 6e-12
>BF01019A1H08
Length = 504
Score = 149 bits (75), Expect = 3e-35
Identities = 105/115 (91%)
Strand = Plus / Minus
Query: 1155 ttagataggggccccttaaacctacacctgggtcacaagtcccaggaactgtttacgctc 1214
||||||||| |||||||||||||||||||||||| ||| ||||||| |||||| | ||||
Sbjct: 492 ttagataggagccccttaaacctacacctgggtcgcaactcccaggcactgttgaagctc 433
Query: 1215 ctctccatgcaacgcgatggaatcggcacccgcacggtgaatccattaaatgcta 1269
|||||| |||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct: 432 ctctccctgcaacgcgatggacccggcacccgcacggtgaatccattgaatgcta 378
>BF14_335_C4
Length = 1491
Score = 105 bits (53), Expect = 5e-22
Identities = 87/97 (89%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 1164 ggccccttaaacctacacctgggtcacaagtcccaggaactgtttacgctcctctccatg 1223
||||||||||||||||||||||||| ||||||||||| |||||| | |||||||||| ||
Sbjct: 1246 ggccccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctctcc-tg 1304
Query: 1224 caacgcgatggaatcggcacccgcacggtgaatccat 1260
||||||||||| | ||| |||||||||||||||||
Sbjct: 1305 caacgcgatggtccccgcaaccgcacggtgaatccat 1341
>BF14_335_C2
Length = 1827
Score = 99.6 bits (50), Expect = 3e-20
Identities = 93/106 (87%), Gaps = 1/106 (0%)
Strand = Plus / Minus
Query: 1155 ttagataggggccccttaaacctacacctgggtcacaagtcccaggaactgtttacgctc 1214
|||||||||||| | ||||||||||||||| ||| ||| ||||||| |||||| | ||||
Sbjct: 935 ttagataggggctc-ttaaacctacacctgtgtcgcaaatcccaggcactgttgaagctc 877
Query: 1215 ctctccatgcaacgcgatggaatcggcacccgcacggtgaatccat 1260
|||||| ||||||||| ||| |||||||||||||||||||||||
Sbjct: 876 ctctccctgcaacgcggcggacccggcacccgcacggtgaatccat 831
>BF01049B1F01
Length = 840
Score = 83.8 bits (42), Expect = 2e-15
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 1163 gggccccttaaacctacacctgggtcacaagtcccaggaactgtttacgctcctctccat 1222
|||||||||| ||||||||||||||| ||||||||||| |||||| | |||||||||| |
Sbjct: 652 gggccccttacacctacacctgggtcgcaagtcccaggcactgttgaagctcctctccct 593
Query: 1223 gcaacg 1228
||||||
Sbjct: 592 gcaacg 587
>BF01016A2B02
Length = 780
Score = 71.9 bits (36), Expect = 6e-12
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 1155 ttagataggggccccttaaacctacacctgggtcacaagtcccaggaactgtttacgctc 1214
||||||||||||| ||||| |||||||||| ||| ||| ||||||| |||||| | ||||
Sbjct: 297 ttagataggggcctcttaagcctacacctgagtcgcaattcccaggcactgttgaagctc 238
Query: 1215 ctctccatgcaacgcg 1230
|||||| | |||||||
Sbjct: 237 ctctcccttcaacgcg 222
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 316,681
Number of extensions: 5869
Number of successful extensions: 5869
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 5867
Number of HSP's successfully gapped: 5
Length of query: 3370
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3352
Effective length of database: 8,109,745
Effective search space: 27183865240
Effective search space used: 27183865240
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)