BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16037 (UTR included)
(2215 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01059A1C08 1532 0.0
BF01055A1H03 775 0.0
>BF01059A1C08
Length = 808
Score = 1532 bits (773), Expect = 0.0
Identities = 799/808 (98%)
Strand = Plus / Plus
Query: 413 gtttttataaaaatgtagctgataataaaaaaattaatattctaccaaaggtgtatttcg 472
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtttttataanaatgtagctgataataaaaaaattaatattctaccaaaggtgtatttcg 60
Query: 473 tttggtgaaacaacgaaattgttttacgatgactactttacaagatatttatgataaaat 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttggtgaaacaacgaaattgttttacgatgactactttacaagatatttatgataaaat 120
Query: 533 tgaagaatttaagccagttgtgatatcatcgttaaaggaaatttctgaactggatataac 592
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 121 tgaagaatttaagccagttgtgatatcatcgttaaaggaaatttctgaactagatataac 180
Query: 593 atgtaaatcaataattgaggaacaattaaataatagcaatttactgaatgcgacatcgat 652
|||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 181 atgtaaatcaataattgaacaacaattaaataataccaatttactgaatgcgacatcgat 240
Query: 653 aattaaaatccaagctgtcattgattatatgtatgaacatgttaatataggaaattggaa 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aattaaaatccaagctgtcattgattatatgtatgaacatgttaatataggaaattggaa 300
Query: 713 agaagtgaggttatacttaagaaaaactataacgattgcgtcttatgtgcgccttctggg 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agaagtgaggttatacttaagaaaaactataacgattgcgtcttatgtgcgccttctggg 360
Query: 773 ccatttaaaatgtagtacccttctgactaatgatgtgattaaagaagggctaaaaataat 832
|||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct: 361 ccatttaaaatgtagtacccatctgactaatgatgttattaaagaagggctaaaaataat 420
Query: 833 tgattttggcatactatttggttgtcctatggagacagaacctacattgcttcaagactg 892
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 421 tgattttggcatactatttggttgtcctacggagacagaacctacattgcttcaagactg 480
Query: 893 tgcatcatatcttcataacgctctcacacccgatgatctaaaacccgaaggaaatataca 952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgcatcatatcttcataacgctctcacacccgatgatctaaaacccgaaggaaatataca 540
Query: 953 aactggtttgactagtgatatggaattaaaaaataaatcatttaattgtaccgtcttaga 1012
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aactggtttgactagtgatatggaattaaaaaataaatcatttaattgtaccgtcttaga 600
Query: 1013 tgttattgactgccccagtatggaaacatttttgaaaaattacattctcgctgagaaacc 1072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgttattgactgccccagtatggaaacatttttgaaaaattacattctcgctgagaaacc 660
Query: 1073 agttgttttagataattgtatcaatcattggccagcattaactaaatggcaggatcagaa 1132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 agttgttttagataattgtatcaatcattggccagcattaactaaatggcaggatcagaa 720
Query: 1133 ctattttatcaaattggctggtctcagaactgtttctattgaattaggaagagactacac 1192
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 721 ctattttatcaaattggctggtctcagaactgtttccattgaattaggaagagactacac 780
Query: 1193 tgattcaaattggacacagaagttgatg 1220
||||||||||||||||||||||||||||
Sbjct: 781 tgattcaaattggacacagaagttgatg 808
>BF01055A1H03
Length = 806
Score = 775 bits (391), Expect = 0.0
Identities = 404/409 (98%)
Strand = Plus / Minus
Query: 1807 caaaaatttaatgtcttagtgatgtagtgtagttataaatgtgttatctcttgcatgaac 1866
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 806 caaaaatttaatgtcttagtgatgtagtgtagttataaatgtgttatnncttgcatgaac 747
Query: 1867 agtagttatgggtgattggataatcatgtgatgtgccgaaacatatttttggtgcgagat 1926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 agtagttatgggtgattggataatcatgtgatgtgccgaaacatatttttggtgcgagat 687
Query: 1927 gtttagtagaaataattctccatttttatcactataataacttcagacaactgtattgat 1986
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 gtttagtagaaataattctccatttttatcactataataacttcagacaactgtattgat 627
Query: 1987 gtatgtgattgtagtatgacataggaatagcaaaataacttgtaataaaagacctgtttg 2046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 gtatgtgattgtagtatgacataggaatagcaaaataacttgtaataaaagacctgtttg 567
Query: 2047 cgtagattaataaaattttgtttgacacagttattattagttaataatagttgaatctcc 2106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 cgtagattaataaaattttgtttgacacagttattattagttaataatagttgaatctcc 507
Query: 2107 tcagatataatgaatctgtacctctgccattttttccataacatatctgtatgtaaacga 2166
|||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 506 tcagatataatgaatctgtagccctgccattttttccataacatatctgtatgtaaacga 447
Query: 2167 cttttagttactgttgcaatttttgtttacaatttttgtttttttatta 2215
||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 446 cttttagttactgttgcaatttttgtttacaatttttttttttttatta 398
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 328,202
Number of extensions: 7383
Number of successful extensions: 7383
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7382
Number of HSP's successfully gapped: 2
Length of query: 2215
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2198
Effective length of database: 8,119,229
Effective search space: 17846065342
Effective search space used: 17846065342
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)