BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16040 (UTR included)
(4012 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3336_C1 1473 0.0
>BF14_3336_C1
Length = 965
Score = 1473 bits (743), Expect = 0.0
Identities = 791/806 (98%), Gaps = 2/806 (0%)
Strand = Plus / Plus
Query: 3209 atcagttggtcctatgggagggggattgtcgccactcgttggtggtattttggacgcttt 3268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 atcagttggtcctatgggagggggattgtcgccactcgttggtggtattttggacgcttt 63
Query: 3269 acccgccatgagaaaagccaacgtacccgccgctcagtgcctactatttttggagagcaa 3328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 acccgccatgagaaaagccaacgtacccgccgctcagtgcctactatttttggagagcaa 123
Query: 3329 actccgcgaattctgtgtactatcaaaaactttagccgacatattgatgtccaccgactt 3388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 actccgcgaattctgtgtactatcaaaaactttagccgacatattgatgtccaccgactt 183
Query: 3389 ttgtgatatagcaacactaacaaaatctttgaatgtggatgttaacgacgtccctctatt 3448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 ttgtgatatagcaacactaacaaaatctttgaatgtggatgttaacgacgtccctctatt 243
Query: 3449 attggcggtcgctacaacccacacgccggaactagctactagatatggtattagctatag 3508
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 attggcggtcgccacaacccacacgccggaactagctactagatatggtattagctatag 303
Query: 3509 atgataatgaactaattaataaagtgcagcactcggtgaacgatatgcacaccctgtata 3568
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 304 atgataatgaactaattaataaagtgcagcactcggtgaacaatatgcacaccctgtata 363
Query: 3569 acacctgcacttgtcactgaaaacataactcggacgccataattgggtataaataattac 3628
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 acacatgcacttgtcactgaaaacataactcggacgccataattgggtataaataattac 423
Query: 3629 aagggggctttaaagtttatgttgaagtgtaacactttgtaagtaagcaatagcaaacac 3688
|||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||
Sbjct: 424 aagggggctttaaagtttatgttgaagtgtaacactttgtaagtaatcaataccaagcac 483
Query: 3689 ttctcaataaaatattattgaaatataaattgaaaaacagctgctaataacagaattact 3748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ttctcaataaaatattattgaaatataaattgaaaaacagctgctaataacagaattact 543
Query: 3749 tacatggtaagaagttttaaaataaagtttaaaacttggtaattattgtgaa--cttcaa 3806
||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||
Sbjct: 544 tacatggtaagaagttttaaaatgaagtttaaaacctggtaattattgtgaactcttcaa 603
Query: 3807 aaaatatatattatattgaattaaagtactcactttttctcaatattaaaaatcagattt 3866
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 604 caaatatatattatattgaattaaagtgctcactttttctcaatattaaaaatcagaatt 663
Query: 3867 tgcatctgatgattataaaatatatctactgtctgccaaacttggtatttataatgtgat 3926
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 tgcatgtgatgattataaaatatatctactgtctgccaaacttggtatttataatgtgat 723
Query: 3927 agacaactttaaaatcaaaaattacatatgtatataatatttttattacctaagcactgt 3986
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 724 agacaactttaaaatcaaaaattacatatgtatataaaatttttattacctaagcactgt 783
Query: 3987 tatatattttatataaagtaaaaatt 4012
||||||||||||||||||||||||||
Sbjct: 784 tatatattttatataaagtaaaaatt 809
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 446,481
Number of extensions: 9600
Number of successful extensions: 9600
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9599
Number of HSP's successfully gapped: 1
Length of query: 4012
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3994
Effective length of database: 8,109,745
Effective search space: 32390321530
Effective search space used: 32390321530
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)