BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DPGLEAN16065 (UTR included)
         (1444 letters)

Database: est 
           9484 sequences; 8,280,457 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BF01056B1D02                                                           74   7e-13
BF01023A2A12                                                           70   1e-11

>BF01056B1D02
          Length = 778

 Score = 73.8 bits (37), Expect = 7e-13
 Identities = 58/65 (89%)
 Strand = Plus / Plus

                                                                        
Query: 1302 gtgaaggaaaacatcgtgaggaaaactgcatttataatatcaaattataagtttgaaatc 1361
            |||||||||||| ||||||||||| |||   ||||||| |||||||||||| ||||||||
Sbjct: 584  gtgaaggaaaacgtcgtgaggaaacctggtcttataatttcaaattataagattgaaatc 643

                 
Query: 1362 gccaa 1366
            |||||
Sbjct: 644  gccaa 648


>BF01023A2A12
          Length = 723

 Score = 69.9 bits (35), Expect = 1e-11
 Identities = 59/67 (88%)
 Strand = Plus / Plus

                                                                        
Query: 1302 gtgaaggaaaacatcgtgaggaaaactgcatttataatatcaaattataagtttgaaatc 1361
            |||||||| ||| ||||||||||| |||   ||||||| |||||||||||||||||||||
Sbjct: 183  gtgaaggagaacgtcgtgaggaaacctggtcttataatttcaaattataagtttgaaatc 242

                   
Query: 1362 gccaatc 1368
             ||||||
Sbjct: 243  accaatc 249


  Database: est
    Posted date:  Jul 14, 2011  2:25 PM
  Number of letters in database: 8,280,457
  Number of sequences in database:  9484
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 328,963
Number of extensions: 42850
Number of successful extensions: 42850
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 42850
Number of HSP's successfully gapped: 2
Length of query: 1444
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1427
Effective length of database: 8,119,229
Effective search space: 11586139783
Effective search space used: 11586139783
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)