BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16079 (UTR included)
(2176 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01010B2B10 1550 0.0
>BF01010B2B10
Length = 790
Score = 1550 bits (782), Expect = 0.0
Identities = 782/782 (100%)
Strand = Plus / Plus
Query: 308 ttatacgttttgtacttgtagacactttttaaattatgagcctttgaccccgttatttaa 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 ttatacgttttgtacttgtagacactttttaaattatgagcctttgaccccgttatttaa 68
Query: 368 tacttattcaaataaccataaaaaatatattatgagtgaagtgaaaaatgttcgtagcaa 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 tacttattcaaataaccataaaaaatatattatgagtgaagtgaaaaatgttcgtagcaa 128
Query: 428 tcattaagggttctttatgttttgtggtgtattaaatgcacaattaagttaattcaagat 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 tcattaagggttctttatgttttgtggtgtattaaatgcacaattaagttaattcaagat 188
Query: 488 catttcaacaattatgtgtagtcttacgaggttaaacgaagataaagagaggtccccgtg 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 catttcaacaattatgtgtagtcttacgaggttaaacgaagataaagagaggtccccgtg 248
Query: 548 cttggctgagggaaacgattcaaacaggatgctgggtgcaaggagacgcatcttcctgga 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 cttggctgagggaaacgattcaaacaggatgctgggtgcaaggagacgcatcttcctgga 308
Query: 608 cgtgctgatggcgtgctggggtctaggcacctggctgggtgtcaacggcctgtacgtgca 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 cgtgctgatggcgtgctggggtctaggcacctggctgggtgtcaacggcctgtacgtgca 368
Query: 668 gctgccgctgttggtagagcggctgcccgagggctgggcgctgccgtcctccatgacggt 727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gctgccgctgttggtagagcggctgcccgagggctgggcgctgccgtcctccatgacggt 428
Query: 728 ggccatccaactggccaacgtggggctcatcgcctacgccgctatgaggaggctgttacc 787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ggccatccaactggccaacgtggggctcatcgcctacgccgctatgaggaggctgttacc 488
Query: 788 gcgcgccccagactctccgtacatctacatcctcctgtcagtgggcacactggccctgta 847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 gcgcgccccagactctccgtacatctacatcctcctgtcagtgggcacactggccctgta 548
Query: 848 tctgaactccttcctgtatacggagaccgccgtattaggagaagccaaccgctccgtgtc 907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 tctgaactccttcctgtatacggagaccgccgtattaggagaagccaaccgctccgtgtc 608
Query: 908 gttcctcgccctcacattcttcgcggctctcgtgggttgtacgagctcagtgttgtttta 967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 gttcctcgccctcacattcttcgcggctctcgtgggttgtacgagctcagtgttgtttta 668
Query: 968 cccttacttaagacatttccgcgacgtgtatctcgctacgtacttagtgggcgagggttt 1027
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 cccttacttaagacatttccgcgacgtgtatctcgctacgtacttagtgggcgagggttt 728
Query: 1028 gagtggcttcttaccgagtttgttcgccttgatccagggggtcggcggaaatccggaatg 1087
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 gagtggcttcttaccgagtttgttcgccttgatccagggggtcggcggaaatccggaatg 788
Query: 1088 cg 1089
||
Sbjct: 789 cg 790
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 209,622
Number of extensions: 4202
Number of successful extensions: 4202
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4202
Number of HSP's successfully gapped: 1
Length of query: 2176
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2159
Effective length of database: 8,119,229
Effective search space: 17529415411
Effective search space used: 17529415411
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)