BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16081 (UTR included)
(1771 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1323_C1 1308 0.0
>BF14_1323_C1
Length = 1029
Score = 1308 bits (660), Expect = 0.0
Identities = 681/688 (98%)
Strand = Plus / Minus
Query: 1084 tggccggagcctgctctactcgctatcagataacgccctttgtacttcgacactacacac 1143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 937 tggccggagcctgctctactcgctatcagataacgccctttgtacttcgacactacacac 878
Query: 1144 aatactcggttggttcagaagagaccgggaccaagaggaaattgaaatcagagaggaagt 1203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 877 aatactcggttggttcagaagagaccgggaccaagaggaaattgaaatcagagaggaagt 818
Query: 1204 ttgaagaatgtttgattggaaaaaagaatagtgtcagggtttcatctggtccggagtgtg 1263
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 817 ttgaagaatgtttgattggaaaaaagaatagtgtcagggtttcatctggtccgtagtgtg 758
Query: 1264 gcatgtaatattacatgatgcatgtgtccaaagagagcgaacgagcagtggcgggaacat 1323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 gcatgtaatattacatgatgcatgtgtccaaagagagcgaacgagcagtggcgggaacat 698
Query: 1324 taagtcagttcgggcactgtaatgttgtcggggacgtttccgacgagtggttggagtcca 1383
||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||
Sbjct: 697 taagtcagtacgggcactgtaatgttgtcggggacatttccgacgagtggttcgagtcca 638
Query: 1384 gcacgtgacggtcggtccaggtcggtacaaaaatataacgactccgcgtctacctctcat 1443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 gcacgtgacggtcggtccaggtcggtacaaaaatataacgactccgcgtctacctctcat 578
Query: 1444 acttaagtcctaataataattctaagtcggagcgggccagggcgacggcctctataatga 1503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 acttaagtcctaataataattctaagtcggagcgggccagggcgacggcctctataatga 518
Query: 1504 atcccttaaattaatgttaacataatatattatagtgacgtcacacgacaccgtgttacg 1563
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 517 atcccttaaattaacgttaacataatatattatagtgacgtcacacgacaacgtgttacg 458
Query: 1564 tcacagaccctaacctctcaccttcaagcgatccacacaacgtgtcggctggagagtcgc 1623
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 457 tcacagaccctaacctctcaccttcgagcgatccacacaacgtgtcggctggagagtcgc 398
Query: 1624 cagcgacagttttgtcgtcggatgcctatcttatacaactagccacacgaggcgccgccg 1683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 cagcgacagttttgtcgtcggatgcctatcttatacaactagccacacgaggcgccgccg 338
Query: 1684 gccgcccccttacagactatgttcattacattgagtcgcttgtcatctgtcctcgtgttt 1743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 gccgcccccttacagactatgttcattacattgagtcgcttgtcatctgtcctcgtgttt 278
Query: 1744 gtgttttgacggcgcaggtccgggagtg 1771
||||||||||||||||||||||||||||
Sbjct: 277 gtgttttgacggcgcaggtccgggagtg 250
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 203,852
Number of extensions: 4072
Number of successful extensions: 4072
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4072
Number of HSP's successfully gapped: 1
Length of query: 1771
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1754
Effective length of database: 8,119,229
Effective search space: 14241127666
Effective search space used: 14241127666
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)