BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16082 (UTR included)
(1816 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_573_C1 1723 0.0
>BF14_573_C1
Length = 895
Score = 1723 bits (869), Expect = 0.0
Identities = 889/895 (99%), Gaps = 1/895 (0%)
Strand = Plus / Plus
Query: 300 tcaaacttagtatcatagttgtaaattctttt-ttttatattttattaactcataaaaac 358
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 1 tcaaacttagtatcatagttgtatattctttttttttatattttattaactcataaaaac 60
Query: 359 agaaaacaaattggatttgaaaattttgaatacatcgaactttataaatacacttcttgt 418
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agaaaannaattggatttgaaaattttgaatacatcgaactttataaatacacttcttgt 120
Query: 419 gacaatgttatgatttaagaatgtgtataatgttaacgatagtttccactttttttgtat 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gacaatgttatgatttaagaatgtgtataatgttaacgatagtttccactttttttgtat 180
Query: 479 caaataatttaaattctaggcgatggaagggtttgccttaaagatcataattttaatata 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caaataatttaaattctaggcgatggaagggtttgccttaaagatcataattttaatata 240
Query: 539 tatttttattcaaccgtcaaacctccaacttcttatcaatgttaaaaatcagggtggtga 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tatttttattcaaccgtcaaacctccaacttcttatcaatgttaaaaatcagggtggtga 300
Query: 599 tgttatgcaggaaaatataacagcaaacgtatcagaagatacagttaccctggaattttt 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgttatgcaggaaaatataacagcaaacgtatcagaagatacagttaccctggaattttt 360
Query: 659 aagactagacggaatatacgtctcgcagctcgtcgacttcacaaatgaggtggaggctat 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aagactagacggaatatacgtctcgcagctcgtcgacttcacaaatgaggtggaggctat 420
Query: 719 gaaaattgtgataccagctgaggaagagctgggtcagactggtcaccagatactctgctt 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gaaaattgtgataccagctgaggaagagctgggtcagactggtcaccagatactctgctt 480
Query: 779 cctcactcatgctgctcaagcagactttattgctcctgatgctatggccaaactgcgtca 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cctcactcatgctgctcaagcagactttattgctcctgatgctatggccaaactgcgtca 540
Query: 839 aaaaaacccaggcacagtgagggttgcagaggaagacaagggctggagacagaccactac 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaaaaacccaggcacagtgagggttgcagaggaagacaagggctggagacagaccactac 600
Query: 899 aacagcttgggcagggtgcgccacacggttattatctccggcagctgctagacactgtag 958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aacagcttgggcagggtgcgccacacggttattatctccggcagctgctagacactgtag 660
Query: 959 tgctgctcgagatagggtctacttaagaactgcagatcttaccagatggggccctcgtcc 1018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tgctgctcgagatagggtctacttaagaactgcagatcttaccagatggggccctcgtcc 720
Query: 1019 tggtctagagcagtcttcatattcatcagaagtaacaccgttcccctcccacgttctaat 1078
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 721 tggtctagagcagtcttcatattcatcagaagtaacaccattcccctcccacgttctaat 780
Query: 1079 gtcggacacagccgacggcaaacctgcagttggtgtgtgtgttgctgaaacagatgctgg 1138
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gtcggacacacccgacggcaaacctgcagttggtgtgtgtgttgctgaaacagatgctgg 840
Query: 1139 caaggagtgcatctgtcatttggaggtttgtgtcaactggtacccttgtggtctg 1193
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 caaggagtgcatctgtcatttggaggtttgtgtcaactggtacccttgtggtctg 895
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 254,364
Number of extensions: 6193
Number of successful extensions: 6193
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6192
Number of HSP's successfully gapped: 1
Length of query: 1816
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1799
Effective length of database: 8,119,229
Effective search space: 14606492971
Effective search space used: 14606492971
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)