BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16094 (UTR included)
(3220 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01043B2H01 1530 0.0
BF14_1105_C1 959 0.0
>BF01043B2H01
Length = 813
Score = 1530 bits (772), Expect = 0.0
Identities = 775/776 (99%)
Strand = Plus / Plus
Query: 443 aataaaaagatatttattattttttaattgaaacgttaaaagagctttcattcgagtaat 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aataaaaagatatttattattttttaattgaaacgttaaaagagctttcattcgagtaat 60
Query: 503 gggttcgaagaaacataaaaaagaatcgaaaaagaggaagcacagaagtagatccaggtc 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gggttcgaagaaacataaaaaagaatcgaaaaagaggaagcacagaagtagatccaggtc 120
Query: 563 tcctttggatggtgaagagcgtgaacgaaagaggcacaggaaacacaaggatcgcaagaa 622
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 121 tcctttggatggtgaagagcgtgaacgaaagaggcacaggaaacacaaggatcgcaagta 180
Query: 623 agatcgctctccggatgtggaggaggtgccggtggactcgcacctggagcgcgaggcgga 682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agatcgctctccggatgtggaggaggtgccggtggactcgcacctggagcgcgaggcgga 240
Query: 683 accctcgcccgcgcccagcagcagctccagcgctaggagacatgaaggaagagacaaaag 742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 accctcgcccgcgcccagcagcagctccagcgctaggagacatgaaggaagagacaaaag 300
Query: 743 ccaggagtcggaacgtgactcgtcacccacgcccgcctcggggtcggctcaggagagtct 802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccaggagtcggaacgtgactcgtcacccacgcccgcctcggggtcggctcaggagagtct 360
Query: 803 ctccatagaagagaccaacaaactgcgagccaagctggggctgaaaccacttgaagtgcc 862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctccatagaagagaccaacaaactgcgagccaagctggggctgaaaccacttgaagtgcc 420
Query: 863 agagaaacctgccgacgacggtaagttcaaggatgacctgggagagttctaccacgtgcc 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agagaaacctgccgacgacggtaagttcaaggatgacctgggagagttctaccacgtgcc 480
Query: 923 cgcctccaacatcgccgcgcagaagaaagcggacaagttgagagagaagctcgccgagag 982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgcctccaacatcgccgcgcagaagaaagcggacaagttgagagagaagctcgccgagag 540
Query: 983 gagggacaagagggacatcgacaacaagttacagacctccctgctggccgagggttccga 1042
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gagggacaagagggacatcgacaacaagttacagacctccctgctggccgagggttccga 600
Query: 1043 tgatgaagacgcctccgcctgggtcaggaagacgcgggacatggagaaacagaagcagga 1102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgatgaagacgcctccgcctgggtcaggaagacgcgggacatggagaaacagaagcagga 660
Query: 1103 agccgccaagagagcggctctgctggacgagatggacgaggtgttcggtgtgggcgcgct 1162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 agccgccaagagagcggctctgctggacgagatggacgaggtgttcggtgtgggcgcgct 720
Query: 1163 cgtggcggacgaccagcaccgagaccgacaggaggcctaccaccaggaacatctca 1218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cgtggcggacgaccagcaccgagaccgacaggaggcctaccaccaggaacatctca 776
>BF14_1105_C1
Length = 771
Score = 959 bits (484), Expect = 0.0
Identities = 487/488 (99%)
Strand = Plus / Plus
Query: 639 gtggaggaggtgccggtggactcgcacctggagcgcgaggcggaaccctcgcccgcgccc 698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 gtggaggaggtgccggtggactcgcacctggagcgcgaggcggaaccctcgcccgcgccc 343
Query: 699 agcagcagctccagcgctaggagacatgaaggaagagacaaaagccaggagtcggaacgt 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 agcagcagctccagcgctaggagacatgaaggaagagacaaaagccaggagtcggaacgt 403
Query: 759 gactcgtcacccacgcccgcctcggggtcggctcaggagagtctctccatagaagagacc 818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gactcgtcacccacgcccgcctcggggtcggctcaggagagtctctccatagaagagacc 463
Query: 819 aacaaactgcgagccaagctggggctgaaaccacttgaagtgccagagaaacctgccgac 878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 aacaaactgcgagccaagctggggctgaaaccacttgaagtgccagagaaacctgccgac 523
Query: 879 gacggtaagttcaaggatgacctgggagagttctaccacgtgcccgcctccaacatcgcc 938
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 524 gacggtaagttcaaggatgacctgggggagttctaccacgtgcccgcctccaacatcgcc 583
Query: 939 gcgcagaagaaagcggacaagttgagagagaagctcgccgagaggagggacaagagggac 998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 gcgcagaagaaagcggacaagttgagagagaagctcgccgagaggagggacaagagggac 643
Query: 999 atcgacaacaagttacagacctccctgctggccgagggttccgatgatgaagacgcctcc 1058
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 atcgacaacaagttacagacctccctgctggccgagggttccgatgatgaagacgcctcc 703
Query: 1059 gcctgggtcaggaagacgcgggacatggagaaacagaagcaggaagccgccaagagagcg 1118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 gcctgggtcaggaagacgcgggacatggagaaacagaagcaggaagccgccaagagagcg 763
Query: 1119 gctctgct 1126
||||||||
Sbjct: 764 gctctgct 771
Score = 466 bits (235), Expect = e-130
Identities = 235/235 (100%)
Strand = Plus / Plus
Query: 405 aaagttattgcaaatggctcctgcgcgtccgtaacctaaataaaaagatatttattattt 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaagttattgcaaatggctcctgcgcgtccgtaacctaaataaaaagatatttattattt 60
Query: 465 tttaattgaaacgttaaaagagctttcattcgagtaatgggttcgaagaaacataaaaaa 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttaattgaaacgttaaaagagctttcattcgagtaatgggttcgaagaaacataaaaaa 120
Query: 525 gaatcgaaaaagaggaagcacagaagtagatccaggtctcctttggatggtgaagagcgt 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaatcgaaaaagaggaagcacagaagtagatccaggtctcctttggatggtgaagagcgt 180
Query: 585 gaacgaaagaggcacaggaaacacaaggatcgcaagaaagatcgctctccggatg 639
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaacgaaagaggcacaggaaacacaaggatcgcaagaaagatcgctctccggatg 235
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 276,321
Number of extensions: 5564
Number of successful extensions: 5564
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5564
Number of HSP's successfully gapped: 3
Length of query: 3220
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3202
Effective length of database: 8,109,745
Effective search space: 25967403490
Effective search space used: 25967403490
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)