BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16101 (UTR included)
(2800 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_353_C3 1300 0.0
BF01040A2A07 1035 0.0
BF01009B2A06 474 e-133
BF01014B2E07 94 1e-18
>BF14_353_C3
Length = 3001
Score = 1300 bits (656), Expect = 0.0
Identities = 662/664 (99%)
Strand = Plus / Minus
Query: 1 cctccgctggtggcttgggctccggtttaggttgttccacgaccggcttaggttctgcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2223 cctccgctggtggcttgggctccggtttaggttgttccacgaccggcttaggttctgcca 2164
Query: 61 gtgtttcggatttcagatcgggtttgggttcagagacaggagccggggccgagactgcgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2163 gtgtttcggatttcagatcgggtttgggttcagagacaggagccggggccgagactgcgg 2104
Query: 121 cggccggtgggggaacggccttagggggctccgggagatgcaagggcgactcccccgctg 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 2103 cggccggtgggggaacggccttaggtggctccgggagatgcaagggcgactcccccgctg 2044
Query: 181 tatccgcgtcggattcgctgtccgtgaacttgtcggcgacgtggtccatcttgtcggaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2043 tatccgcgtcggattcgctgtccgtgaacttgtcggcgacgtggtccatcttgtcggaaa 1984
Query: 241 cggagggcgcccgagtcgtatccacgaactcgtcacgttccatgtccaggaagctctgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1983 cggagggcgcccgagtcgtatccacgaactcgtcacgttccatgtccaggaagctctgtg 1924
Query: 301 tggcgtgtctcgccgcgtcctgtttgtggagaggtgactcctccgcttcctctcgcttcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1923 tggcgtgtctcgccgcgtcctgtttgtggagaggtgactcctccgcttcctctcgcttcc 1864
Query: 361 cgtcccgatccaagtgttcgaagtcgtccgtagagtcctgatcgcgcttcatggtggctg 420
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1863 cgtcccgatccaaatgttcgaagtcgtccgtagagtcctgatcgcgcttcatggtggctg 1804
Query: 421 gagccgcaccgtcgccactcgccaaccctcctattaaaccgtccgagctatccattttta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1803 gagccgcaccgtcgccactcgccaaccctcctattaaaccgtccgagctatccattttta 1744
Query: 481 tttaatatgaaagcgactagatgagacagatcaaagtaatcaatagtgggtgcggtgtca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1743 tttaatatgaaagcgactagatgagacagatcaaagtaatcaatagtgggtgcggtgtca 1684
Query: 541 ctgaaattaggagatatgaggagtgcggaggtgatcctgtcgtgcctctccgcagtttcg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1683 ctgaaattaggagatatgaggagtgcggaggtgatcctgtcgtgcctctccgcagtttcg 1624
Query: 601 aactgaaaggtctgcgcgccgctcgccggctgccgctggacgacgtcactcagcacgaca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1623 aactgaaaggtctgcgcgccgctcgccggctgccgctggacgacgtcactcagcacgaca 1564
Query: 661 aacg 664
||||
Sbjct: 1563 aacg 1560
Score = 716 bits (361), Expect = 0.0
Identities = 367/369 (99%)
Strand = Plus / Minus
Query: 664 gtgcggttaggacggcgaggatggtggacaccacggtagtgactagtgttgatttaagag 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 882 gtgcggttaggacggcgaggatggtggacaccacggtagtgactagtgttgatttaagag 823
Query: 724 aaactaatttaaacaaaaatgtacaatgtaatggaagtagtggaaaaaatatcaatggaa 783
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 822 aaactaatttaaacaaaaatgtacaatgtaatggaagtagtgaaaaaaatatcaatggaa 763
Query: 784 aaatacatctacagaatgggtctttaaaatctcaaactataagtaatggatccaataaat 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 aaatacatctacagaatgggtctttaaaatctcaaactataagtaatggatccaataaat 703
Query: 844 gtaaggacgagaacgagcgatttccgacgatggactggtctcagtacgacaccttccccg 903
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 702 gtaaggacgagaacgagcgatttccgacgatggactggtctcagtacgacaccttcccgg 643
Query: 904 gctccttcgagaagtgttccctgatgacggcggccctaactcacgtgggcatgtacctgc 963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 gctccttcgagaagtgttccctgatgacggcggccctaactcacgtgggcatgtacctgc 583
Query: 964 tcatgtttctcggcttcgtgaaccagctgctcttcaaaccgaaggtggccaccgagagga 1023
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 tcatgtttctcggcttcgtgaaccagctgctcttcaaaccgaaggtggccaccgagagga 523
Query: 1024 accgggagg 1032
|||||||||
Sbjct: 522 accgggagg 514
>BF01040A2A07
Length = 812
Score = 1035 bits (522), Expect = 0.0
Identities = 525/526 (99%)
Strand = Plus / Minus
Query: 1 cctccgctggtggcttgggctccggtttaggttgttccacgaccggcttaggttctgcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 cctccgctggtggcttgggctccggtttaggttgttccacgaccggcttaggttctgcca 467
Query: 61 gtgtttcggatttcagatcgggtttgggttcagagacaggagccggggccgagactgcgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 gtgtttcggatttcagatcgggtttgggttcagagacaggagccggggccgagactgcgg 407
Query: 121 cggccggtgggggaacggccttagggggctccgggagatgcaagggcgactcccccgctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 cggccggtgggggaacggccttagggggctccgggagatgcaagggcgactcccccgctg 347
Query: 181 tatccgcgtcggattcgctgtccgtgaacttgtcggcgacgtggtccatcttgtcggaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 tatccgcgtcggattcgctgtccgtgaacttgtcggcgacgtggtccatcttgtcggaaa 287
Query: 241 cggagggcgcccgagtcgtatccacgaactcgtcacgttccatgtccaggaagctctgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 cggagggcgcccgagtcgtatccacgaactcgtcacgttccatgtccaggaagctctgtg 227
Query: 301 tggcgtgtctcgccgcgtcctgtttgtggagaggtgactcctccgcttcctctcgcttcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 tggcgtgtctcgccgcgtcctgtttgtggagaggtgactcctccgcttcctctcgcttcc 167
Query: 361 cgtcccgatccaagtgttcgaagtcgtccgtagagtcctgatcgcgcttcatggtggctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 cgtcccgatccaagtgttcgaagtcgtccgtagagtcctgatcgcgcttcatggtggctg 107
Query: 421 gagccgcaccgtcgccactcgccaaccctcctattaaaccgtccgagctatccattttta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 gagccgcaccgtcgccactcgccaaccctcctattaaaccgtccgagctatccattttta 47
Query: 481 tttaatatgaaagcgactagatgagacagatcaaagtaatcaatag 526
||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 46 tttaatatgaaagcgactagatgagacagatcaaagtaagcaatag 1
>BF01009B2A06
Length = 770
Score = 474 bits (239), Expect = e-133
Identities = 239/239 (100%)
Strand = Plus / Minus
Query: 426 gcaccgtcgccactcgccaaccctcctattaaaccgtccgagctatccatttttatttaa 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 gcaccgtcgccactcgccaaccctcctattaaaccgtccgagctatccatttttatttaa 229
Query: 486 tatgaaagcgactagatgagacagatcaaagtaatcaatagtgggtgcggtgtcactgaa 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 tatgaaagcgactagatgagacagatcaaagtaatcaatagtgggtgcggtgtcactgaa 169
Query: 546 attaggagatatgaggagtgcggaggtgatcctgtcgtgcctctccgcagtttcgaactg 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 attaggagatatgaggagtgcggaggtgatcctgtcgtgcctctccgcagtttcgaactg 109
Query: 606 aaaggtctgcgcgccgctcgccggctgccgctggacgacgtcactcagcacgacaaacg 664
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 aaaggtctgcgcgccgctcgccggctgccgctggacgacgtcactcagcacgacaaacg 50
>BF01014B2E07
Length = 722
Score = 93.7 bits (47), Expect = 1e-18
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 1 cctccgctggtggcttgggctccggtttaggttgttccacgaccggcttaggttctg 57
||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 57 cctccgctggtggcttgggctccggannaggttgttccacgaccggcttaggttctg 1
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 193,151
Number of extensions: 3371
Number of successful extensions: 3371
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 3371
Number of HSP's successfully gapped: 5
Length of query: 2800
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2783
Effective length of database: 8,119,229
Effective search space: 22595814307
Effective search space used: 22595814307
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)