BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16104 (UTR included)
(3469 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01053A1G02 1614 0.0
>BF01053A1G02
Length = 831
Score = 1614 bits (814), Expect = 0.0
Identities = 820/823 (99%)
Strand = Plus / Plus
Query: 394 tttatatatgttatttttattaaaatgcaacatgtgattgtattttaataatgtaatacc 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 tttatatatgttatttttattaaaatgcaacatgtgattgtattttaataatgtaatacc 68
Query: 454 ataaatgctcattcagttggagtgtgtgttcttagaattgagaaactatggatagtccta 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 ataaatgctcattcagttggagtgtgtgttcttagaattgagaaactatggatagtccta 128
Query: 514 tgaatcgctacgaacaacagctgtatagtgtgttcaaaaccttcgacatagataacgagg 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 tgaatcgctacgaacaacagctgtatagtgtgttcaaaaccttcgacatagataacgagg 188
Query: 574 aagccttaaaaaggtcagcagtacttcagctctgtgactctttacagcttgaagatcgcg 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 aagccttaaaaaggtcagcagtacttcagctctgtgactctttacagcttgaagatcgcg 248
Query: 634 gcgcggcgctcgtggacactctctttgaccgacagagcgaccgtatcacattttcacaat 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 gcgcggcgctcgtggacactctctttgaccgacagagcgaccgtatcacattttcacaat 308
Query: 694 tccgcaacgggttgctctccgtcctagataaagatcccataagacgccaagagaactgct 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 tccgcaacgggttgctctccgtcctagataaagatcccataagacgccaagagaactgct 368
Query: 754 cgagtaaggagagtgtcgtccccaagaccccgagcccggcccagagcgacgacgactcaa 813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 cgagtaaggagagtgtcgtccccaagaccccgagcccggcccagagcgacgacgactcaa 428
Query: 814 gagaggtgggtgctaaattcgctttcggttcggagaggtacgggagacgatcacggcctc 873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gagaggtgggtgctaaattcgctttcggttcggagaggtacgggagacgatcacggcctc 488
Query: 874 atcgcgtcaccgcggaagacacaccgcgtcctcgggtggcgtcggaatctcgtctcgaca 933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 atcgcgtcaccgcggaagacacaccgcgtcctcgggtggcgtcggaatctcgtctcgaca 548
Query: 934 gtgtgcgggcgaggcgacgtatgaggtgcaagaggagctcgtctgcgatggagagtcgcg 993
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 gtgtgcgggcgaggcgacgtatgaggtgcaagaggagctcgtctgcgatggagagtcgcg 608
Query: 994 aggacgacgtgactggtctggaactagaccacgagcaacgcgtcgaccgagatcgagctc 1053
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 aggacgacgtgactggtctggaactagaccacgagcaacgcgtcgaccgagatcgagctc 668
Query: 1054 tcgccctgtgccggggactcgacatgcatggagtcgaccggtttctagtcgaccgcgtct 1113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 tcgccctgtgccggggactcgacatgcatggagtcgaccggtttctagtcgaccgcgtct 728
Query: 1114 ttgcagcctccgatgagaatgaggtgacggtgggcgagttcttcgatcgactgaacgcct 1173
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 729 ttgcagcctccgatgagaatgnnntgacggtgggcgagttcttcgatcgactgaacgcct 788
Query: 1174 cgcttacgacttccattgaaacgtctctagatggaggtattgt 1216
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 cgcttacgacttccattgaaacgtctctagatggaggtattgt 831
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 315,085
Number of extensions: 6420
Number of successful extensions: 6420
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6420
Number of HSP's successfully gapped: 1
Length of query: 3469
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3451
Effective length of database: 8,109,745
Effective search space: 27986729995
Effective search space used: 27986729995
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)