BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16105 (UTR included)
(1573 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3034_C1 985 0.0
>BF14_3034_C1
Length = 1179
Score = 985 bits (497), Expect = 0.0
Identities = 503/505 (99%)
Strand = Plus / Minus
Query: 1069 tgtaaagtagccaagggaagacgagctcgcggagagcggaggccgaagggcggccgaacc 1128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1179 tgtaaagtagccaagggaagacgagctcgcggagagcggaggccgaagggcggccgaacc 1120
Query: 1129 ttccagtgaccgaggtccgtggtggggtggacgtgtcgcgagcgctagtcgaattacata 1188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1119 ttccagtgaccgaggtccgtggtggggtggacgtgtcgcgagcgctagtcgaattacata 1060
Query: 1189 ttaagaattatttaatgaaataacttttaaaataccgttcgcaatatcgttcattacaaa 1248
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1059 ttaagaattatttaatgaaataacttttaaaataccgttcgcaatatggttcattacaaa 1000
Query: 1249 gtttttaaaccgcgtccttgctttaccctgtattatatatgtataatattatttaatcag 1308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 999 gtttttaaaccgcgtccttgctttaccctgtattatatatgtataatattatttaatcag 940
Query: 1309 cacgaagtcgacatatcctctcacgagataacatattcatactcagtacaaactcctact 1368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 939 cacgaagtcgacatatcctctcacgagataacatattcatactcagtacaaactcctact 880
Query: 1369 tccctcggatctaagttctaacaatgagacgctcatctccagtgcaaccaccgctctgtg 1428
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 879 tccctcggatctaagttctaacaatgagacgctcatctccagtgcaaccaccgctttgtg 820
Query: 1429 tatatcggcctaattataatacttgtccatagtccccggcagggggcagcaggcacttac 1488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 tatatcggcctaattataatacttgtccatagtccccggcagggggcagcaggcacttac 760
Query: 1489 cgtactatacagtgggttcgagtcgtcttctgcttcctctaccacacatgttttttccct 1548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 cgtactatacagtgggttcgagtcgtcttctgcttcctctaccacacatgttttttccct 700
Query: 1549 ccttatatgtgttatgtatgaagcg 1573
|||||||||||||||||||||||||
Sbjct: 699 ccttatatgtgttatgtatgaagcg 675
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 197,418
Number of extensions: 4807
Number of successful extensions: 4807
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4807
Number of HSP's successfully gapped: 1
Length of query: 1573
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1556
Effective length of database: 8,119,229
Effective search space: 12633520324
Effective search space used: 12633520324
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)