BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16123 (UTR included)
(1621 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01047B2C04 1001 0.0
>BF01047B2C04
Length = 743
Score = 1001 bits (505), Expect = 0.0
Identities = 511/513 (99%)
Strand = Plus / Plus
Query: 136 ttagacagatatgtcaaaaggcgattttctttaactctttttctaaattttaacgaactc 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttagacagatatgtcaaaaggcgattttctttaactctttttctaaattttaacgaactc 60
Query: 196 caacaagcttctttattgttatgcgtttatttttttagttttaattcttatccaaaatat 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caacaagcttctttattgttatgcgtttatttttttagttttaattcttatccaaaatat 120
Query: 256 tttacaatataagttataattgacagaacatagtgcattcactctaaactggaaagtcac 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tttacaatataagttataattgacagaacatagtgcattcactctaaactggaaagtcac 180
Query: 316 accattacttattataaatactcaatagctgatagttgattagttgctgttattttatgt 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 accattacttattataaatactcaatagctgatagttgattagttgctgttattttatgt 240
Query: 376 caataagagaggtaataacgttttaagttgctctaatcttgggatggtgtagcagcttgc 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 caataagagaggtaataacgttttaagttgctctaatcttgggatggtgtagcagcttgc 300
Query: 436 agtcgtgagcggtgctcacccaaagtactatccattgagacactactaaacaaaaattca 495
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 301 agtcgtgagcggtgctcacccaaagtactatccattgggacactactaaacaaaaattca 360
Query: 496 gtaaaatgtcaaacgtggagaacgtttgcccccaagttcttcgcggagtgacgaaggagc 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtaaaatgtcaaacgtggagaacgtttgcccccaagttcttcgcggagtgacgaaggagc 420
Query: 556 tacggcggctggcagctaatcctccagccggcatcaagctggtgctgcgtgatgatgata 615
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 421 tacggcggctggcagctaatcctccagccggcatcaagctggtactgcgtgatgatgata 480
Query: 616 tcacagacgtggtggcgctcatcgacggccccg 648
|||||||||||||||||||||||||||||||||
Sbjct: 481 tcacagacgtggtggcgctcatcgacggccccg 513
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 198,747
Number of extensions: 4198
Number of successful extensions: 4198
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4198
Number of HSP's successfully gapped: 1
Length of query: 1621
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1604
Effective length of database: 8,119,229
Effective search space: 13023243316
Effective search space used: 13023243316
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)