BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16143 (UTR included)
(2393 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01017B2D03 1324 0.0
BF01011A1H12 1017 0.0
BF14_779_C1 406 e-113
>BF01017B2D03
Length = 712
Score = 1324 bits (668), Expect = 0.0
Identities = 701/712 (98%)
Strand = Plus / Plus
Query: 725 actatggaatcaaggtcatagtagacctgacagccaacttcgtgtccaccagtcatcctt 784
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1 actatggaatcaaggtcatagtagacctgacagccaacttcgtctccaccagtcatcctt 60
Query: 785 ggttccagcagagtgagaaccgttcagagcagttctcggagtacttcatctgggtgaaga 844
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggttccaacagagtgagaaccgttcagagcagttctcggagtacttcatctgggtgaaga 120
Query: 845 gtgatgaacatgatcccgaactcaacaccaccatacccaaaccacctaatgattgggtgt 904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtgatgaacatgatcccgaactcaacaccaccatacccaaaccacctaatgattgggtgt 180
Query: 905 ccacagtgaacactggtgcatggtcttggagtgagagaaggaaggagttctatcttcacc 964
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccacagtgaacactggtgcatggtcttggagtgagagaaggaaggagttctatcttcacc 240
Query: 965 agtatggcgagggactcgctgacctcaacttccacaaccctaatgtagtcaaacagttcg 1024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agtatggcgagggactcgctgacctcaacttccacaaccctaatgtagtcaaacagttcg 300
Query: 1025 atgaggtcatcagactgtggatgaaggccggagccggtggcatcaggttgcacaacgtcc 1084
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atgaggtcatcagactgtggatgaaggccggagccggtggcatcaggttgcacaacgtcc 360
Query: 1085 gtcagctgttagtgagcagtcctcctctgtctgagctgcctcacacgggcgccgggagca 1144
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 361 gtcagctgttagtgagcagtcctcctttgtctgagctgcctcacacgggcgccgggagca 420
Query: 1145 cgccgggggcggaccactcgcagtaccccttctggagacactctcggacctcggaccagc 1204
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 421 cgccgggggcggaccactcgcagtaccccttctggagacactctcggacttcggaccagc 480
Query: 1205 cacagctggattcgctgctggctcactggtcatatatcgtggagcaagcttcctctgagc 1264
|||||||||| ||| |||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 481 cacagctggactcgttgctggctcactggtcgtacatcgtggagcaagcttcctctgagc 540
Query: 1265 cgacggtgttcacgttagcggaaccttcccggccggagctgttcatgctgcaaaggaaca 1324
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 541 cgacggtgttcacgttagcggaaccgtcccggccggagctgttcatgctgcaaaggaaca 600
Query: 1325 cgagttgtctccggcccgccagcggagcacccgtcgacctggcgcggcccggggcggcca 1384
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cgagttgtctacggcccgccagcggagcacccgtcgacctggcgcggcccggggcggcca 660
Query: 1385 agctcctcgctgagcgactgtcacgctggcccgccatacagttgactgatga 1436
|||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 agctcctccctgagcgactgtcacgctggcccgccatacagttgactgatga 712
>BF01011A1H12
Length = 603
Score = 1017 bits (513), Expect = 0.0
Identities = 552/566 (97%)
Strand = Plus / Plus
Query: 1428 gactgatgataagccggacgaggagacggccgtgttttccatgctgctgccggccgcacc 1487
|||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 1 gactgatgataagccggacgaggagacggcnnngttctccatgctgctgccggccgcacc 60
Query: 1488 tgtcatggtcttggaacaactggctggggatgacaatgatactacccccagcgagagttt 1547
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggtcatggtcttggaacaactggctggggatgacaatgatactacccccagcgagagttt 120
Query: 1548 gaagcacgcgatatcactgcgtaccgacgccagtgtgcagcacggagcgttggttgtgac 1607
||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 121 gaagcacgcgatatctctacgtaccgacgccagtgtgcagcacggagcgtgggttgtgac 180
Query: 1608 tgacgcacccgttcacaactccagcgacatgatgctggccgtcgccagatggaaggcgga 1667
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 181 tgacgcacccgttcacaactccagcgacacgatgctggccgtcgccagatggaaggcgga 240
Query: 1668 ccactccggctacgtgtcggtgtataaccccggcgcctctggtctcgtgtctctgtcttc 1727
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 241 ccactccggctacgtgtcggtgtataaccccggcgcctctggtctcgtgtctctatcttc 300
Query: 1728 agtccgctctctgccgtcttccctcgcggtgcatcacgtgtcgaggaacaccaagctcgc 1787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agtccgctctctgccgtcttccctcgcggtgcatcacgtgtcgaggaacaccaagctcgc 360
Query: 1788 ctccaattacaccagtaaccaggccgtggagacggcgagcgtgttcgtcccgggcaagtc 1847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctccaattacaccagtaaccaggccgtggagacggcgagcgtgttcgtcccgggcaagtc 420
Query: 1848 ggcggtgatcttctcgtacgtgccgaaagatggcgctgaaaactgagaactacacgacgc 1907
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 421 ggcggtgatcttctcgtacgtgccgaaagatggcgctgaaaactgagaactacacgtcgc 480
Query: 1908 ctgtgcttcagccgcttgtattcaacggccttttgtttgcattttcatttgtatttttag 1967
|| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtgcgcttcagccgcttgtatttaacggccttttgtttgcattttcatttgtatttttag 540
Query: 1968 ttaacatgaatatatgcttggcaatt 1993
||||||||||||||||||||||||||
Sbjct: 541 ttaacatgaatatatgcttggcaatt 566
>BF14_779_C1
Length = 1304
Score = 406 bits (205), Expect = e-113
Identities = 232/241 (96%)
Strand = Plus / Minus
Query: 2153 ttttaaaaattataagtatatttaaaaaattccaataacatccagcgctgtgttaacatt 2212
|||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1288 tttttaaaatgataagtatatttaaaaaattccaatatcatccagcgctgtgttaacatt 1229
Query: 2213 gaaaaaaagcgtattttttacaaatataaaattaatctgaactaatttttaataataata 2272
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1228 gaaaaaaagcgtattttttacaaatataaaattaatcagaactaatttttaataataata 1169
Query: 2273 atttcttaattttgtcaacagttaatttattcgcctacgagattgaaacaagtacaagag 2332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1168 atttcttaattttgtcaacagttaatttattcgcctacgagattgaaacaagtacaagag 1109
Query: 2333 tacgggctgtgggaatgtaaccactactgatatataatattaaacaggtgatctgttgtt 2392
|||||||| | |||||||||||||||||| |||||||||||||||| |||||||| ||||
Sbjct: 1108 tacgggctttaggaatgtaaccactactgttatataatattaaacacgtgatctggtgtt 1049
Query: 2393 g 2393
|
Sbjct: 1048 g 1048
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 235,181
Number of extensions: 4954
Number of successful extensions: 4954
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 4954
Number of HSP's successfully gapped: 3
Length of query: 2393
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2376
Effective length of database: 8,119,229
Effective search space: 19291288104
Effective search space used: 19291288104
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)