BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16144 (UTR included)
(2180 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_779_C1 952 0.0
BF01011A1H12 125 3e-28
>BF14_779_C1
Length = 1304
Score = 952 bits (480), Expect = 0.0
Identities = 516/528 (97%)
Strand = Plus / Plus
Query: 1427 cgggaaccgtttctatggcacgggctgataatgaagtagagatgtccgcgtgccgtatgg 1486
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 761 cgggaaccgtttctatggcacgggctgataatgaagtagagatgtccgcgtgtcgtatgg 820
Query: 1487 gcgagtactgcttagagaacctcatcctccgcctgtgcctggcggcgctggtgtccttca 1546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 gcgagtactgcttagagaacctcatcctccgcctgtgcctggcggcgctggtgtccttca 880
Query: 1547 ccatctggacggtcatgagattcgttcacgaccacacgtgcgtccgtccgtctcacgccg 1606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881 ccatctggacggtcatgagattcgttcacgaccacacgtgcgtccgtccgtctcacgccg 940
Query: 1607 tactaatacccgacaccgacttcgactccataccaaactttctgcacctcctccatgagg 1666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 941 tactaatacccgacaccgacttcgactccataccaaactttctgcacctcctccatgagg 1000
Query: 1667 ttgaactcgagtgacctcccgactctgactcgctagaccttaatcttcaacaacagatca 1726
| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1001 tcgaactcgaatgacctcccgactctgactcgctagaccttaatcttcaacaccagatca 1060
Query: 1727 cctgtttaatattatatatcagtagtggttacattcccacagcccgtactcttgtacttg 1786
| |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 1061 cgtgtttaatattatataacagtagtggttacattcctaaagcccgtactcttgtacttg 1120
Query: 1787 tttcaatctcgtaggcgaataaattaactgttgacaaaattaagaaattattattattaa 1846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1121 tttcaatctcgtaggcgaataaattaactgttgacaaaattaagaaattattattattaa 1180
Query: 1847 aaattagttcagattaattttatatttgtaaaaaatacgctttttttcaatgttaacaca 1906
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1181 aaattagttctgattaattttatatttgtaaaaaatacgctttttttcaatgttaacaca 1240
Query: 1907 gcgctggatgttattggaattttttaaatatacttataatttttaaaa 1954
|||||||||| |||||||||||||||||||||||||| ||||| ||||
Sbjct: 1241 gcgctggatgatattggaattttttaaatatacttatcattttaaaaa 1288
Score = 579 bits (292), Expect = e-165
Identities = 301/304 (99%)
Strand = Plus / Plus
Query: 1123 ggcacggaagccgagccgttcatcaaccgactccgcaagggacccgccaacacctcctcc 1182
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 128 ggcacggaagccgagccgttcatcaaccgactccgcaagggacccgcaaacacctcctcc 187
Query: 1183 accaagctgcagaagcctctgaacagtacgtggagacagaaacacgaggagttcatccag 1242
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 188 accaagctgcagaagcctctgaacagtacgtggaggcagaaacacgaggagttcatccag 247
Query: 1243 gcgatacgagccgccaagcaagttcaggcgcatctcaacgctggaggtaagttgagcgac 1302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 gcgatacgagccgccaagcaagttcaggcgcatctcaacgctggaggtaagttgagcgac 307
Query: 1303 ttgccgccgcctcctccgtccgagaacccggactacgtccagtgtcctcactgcaagaga 1362
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ctgccgccgcctcctccgtccgagaacccggactacgtccagtgtcctcactgcaagaga 367
Query: 1363 cgcttcaaccaagccgccgccgacagacacatacccaagtgcgccaactttcaattcaac 1422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 cgcttcaaccaagccgccgccgacagacacatacccaagtgcgccaactttcaattcaac 427
Query: 1423 aaaa 1426
||||
Sbjct: 428 aaaa 431
Score = 244 bits (123), Expect = 5e-64
Identities = 126/127 (99%)
Strand = Plus / Plus
Query: 936 tgaaggggcgtgcggcgtctgcgggcggcacttcgcccccgacagactcgccaggcacca 995
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaaggggcgtgcggcgtctgcgggcggcacttcgcccccgacagactcgccaggcacca 60
Query: 996 ggacatctgccgcaagacacacgccaagaagaggaagcccttcgacgtgctcaaacacag 1055
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggacatctgccgcaagacacactccaagaagaggaagcccttcgacgtgctcaaacacag 120
Query: 1056 actagcg 1062
|||||||
Sbjct: 121 actagcg 127
>BF01011A1H12
Length = 603
Score = 125 bits (63), Expect = 3e-28
Identities = 63/63 (100%)
Strand = Plus / Minus
Query: 2114 aattgccaagcatatattcatgttaactaaaaatacaaatgaaaatgcaaacaaaaggcc 2173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 aattgccaagcatatattcatgttaactaaaaatacaaatgaaaatgcaaacaaaaggcc 507
Query: 2174 gtt 2176
|||
Sbjct: 506 gtt 504
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 236,564
Number of extensions: 5295
Number of successful extensions: 5295
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5295
Number of HSP's successfully gapped: 4
Length of query: 2180
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2163
Effective length of database: 8,119,229
Effective search space: 17561892327
Effective search space used: 17561892327
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)