BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16158 (UTR included)
(2317 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3108_C1 1515 0.0
>BF14_3108_C1
Length = 812
Score = 1515 bits (764), Expect = 0.0
Identities = 798/811 (98%), Gaps = 3/811 (0%)
Strand = Plus / Plus
Query: 357 tgtttgacatttagagtaataaataggtt---tgtctacgataataattaatacatagca 413
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 2 tgtttgacatttagagtaataaataggttgtgtgtctacgataataattaatacatagca 61
Query: 414 gttataaattcttctataccaaacaattattgatacattttatgatacaatttgaacata 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gttataaattcttctataccaaacaattattgatacattttatgatacaatttgaacata 121
Query: 474 ttgtatgaaacatattcatttgtcaaaatgaatgtattaccagcacaacctataggtatt 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ttgtatgaaacatattcatttgtcaaaatgaatgtattaccagcacaacctataggtatt 181
Query: 534 cagagtactgctggcgctgtacccgtccgcaatgaaaaaggtgaaatatctatgcaaaaa 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 cagagtactgctggcgctgtacccgtccgcaatgaaaaaggtgaaatatctatgcaaaaa 241
Query: 594 gttaaggtgcagaggtatatatcaggaaagaaaccagattatgctcaaggagttacctcg 653
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gttaaggtgcagaggtatatatcaggaaagaaaccagattatgctcaaggagttacctca 301
Query: 654 tctgaagaatcagaagctgaagattttatagagcaacaaagacctgaacgtcgacaccag 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tctgaagaatcagaagctgaagattttatagagcaacaaagacctgaacgtcgacaccag 361
Query: 714 attgcacagattattagtcagaaggatgatatacaaagtcattcagagaatgaagttgac 773
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 362 attgcacagattattagtcagaaagatgatatacaaagtcattcagagaatgaagttgac 421
Query: 774 gaccctcgtcttcgccgtttacgtgttgcacattctccgcgtcgtgctgaacacaaacca 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gaccctcgtcttcgccgtttacgtgttgcacattctccgcgtcgtgctgaacacaaacca 481
Query: 834 gaggttattgatgctgagccagaacctgaatcagaatcaagtgaagagagtaaacacagt 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gaggttattgatgctgagccagaacctgaatcagaatcaagtgaagagagtaaacacagt 541
Query: 894 tcagaaagtgaagatgaacttgatgaagaagaaattgaaaggagaagacaagctgttaga 953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tcagaaagtgaagatgaacttgatgaagaagaaattgaaaggagaagacaagctgttaga 601
Query: 954 gccaaactagcagctagagaggcagaaaaagaagtattaggaagagaagatgatgaggaa 1013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 gccaaactagcagctagagaggcagaaaaagaagtattaggaagagaagatgatgaggaa 661
Query: 1014 atgttagatggtgacaaagaggaaagtggttcgtcagatactgaatatactgatagcgaa 1073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 atgttagatggtgacaaagaggaaagtggttcgtcagatactgaatatactgatagcgaa 721
Query: 1074 gaagacacagggccaagagtgaagccggtgtttgtgagggcgtcagaaagaatgacagta 1133
||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 722 gaagacacagggccaagagtgaagccggtgtttgtgagggcatcannnnnaatgacagta 781
Query: 1134 gcagagagagaacgtaaacttaaacagcaga 1164
|||| |||||||||||||||||||||||||
Sbjct: 782 gcagnnagagaacgtaaacttaaacagcaga 812
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 325,541
Number of extensions: 8079
Number of successful extensions: 8079
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8077
Number of HSP's successfully gapped: 1
Length of query: 2317
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2300
Effective length of database: 8,119,229
Effective search space: 18674226700
Effective search space used: 18674226700
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)