BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16166 (UTR included)
(2161 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1079_C2 1723 0.0
>BF14_1079_C2
Length = 1214
Score = 1723 bits (869), Expect = 0.0
Identities = 884/889 (99%)
Strand = Plus / Plus
Query: 1273 tcgcgcgtcgtctcggcacagacgcgcagaaccctcacgctcgacgtctcttcgacattt 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcgcgcgtcgtctcggcacagacgcgcagaaccctcacgctcgacgtctcttcgacattt 60
Query: 1333 acaaacagaggtccaacggcctggtcttcttcccggactaccagctgtgtgcgtgttatc 1392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acaaacagaggtccaacggcctggtcttcttcccggactaccagctgtgtgcgtgttatc 120
Query: 1393 tgtctcttcagcatgagcctgttgcgacgattctacaacacgcctttaagctgtacgagg 1452
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgtctcttcagcatgagcctgtcgcgacgattctacaacacgcctttaagctgtacgagg 180
Query: 1453 cgtcaggtcgattgagtcgtaaccagttcgagcacgtcgccgcccgctgtctcggcctgt 1512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgtcaggtcgattgagtcgtaaccagttcgagcacgtcgccgcccgctgtctcggcctgt 240
Query: 1513 gtgtggaggacgcgggtcacgccttcactcaggcggatattgacgagaagacgttcataa 1572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtgtggaggacgcgggtcacgccttcactcaggcggatattgacgagaagacgttcataa 300
Query: 1573 catacgatgacttcataaacttcgctcagaaaaaggcggaattctcatttatcttcacaa 1632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 catacgatgacttcataaacttcgctcagaaaaaggcggaattctcatttatcttcacaa 360
Query: 1633 gtgattcaacaaaaccgaagactcagtgatggcgggcgagcgtcccgaccgtttgcagtc 1692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtgattcaacaaaaccgaagactcagtgatggcgggcgagcgtcccgaccgtttgcagtc 420
Query: 1693 aggtaccgcttatacagaattgacgaaaaaaagattacgaattgagggggaattatggat 1752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aggtaccgcttatacagaattgacgaaaaaaagattacgaattgagggggaattatggat 480
Query: 1753 atggcaatccctattctaaggatattgaattctctttgtccatttttaaatattttatca 1812
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 acggcaatccctattctaaggatattgaattctctttgtccatttttaaatattttatca 540
Query: 1813 taaaatccatatcttttaacatgcataacgaaacctttatgtcaatattttagtaaattt 1872
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 taaaatccatatcttttaacatgcataacgaaacctttatgtcaatattttagtaaattt 600
Query: 1873 atagatattgcgtatttaactatttctatttttgctatgatggaaaacttaaacatattt 1932
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 601 atagatattgcgtatttaactatttctatttttgctaagatggaaaacttaaacatattt 660
Query: 1933 gcttttatgacttcaaattattatgagtaagatttgcttttctatgtaattaattataaa 1992
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 661 gcttttatgacttcaaattattatgagtaagatttgctgttctatgtaattaattataaa 720
Query: 1993 tgtatattttcgtattgcaatgttaagattattttaaaaagcaaatctgttatttagatt 2052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tgtatattttcgtattgcaatgttaagattattttaaaaagcaaatctgttatttagatt 780
Query: 2053 tactacctaatttgaatgtctgtagttacgttcactaggtaaaaaatactcgaatagtac 2112
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tactacctaatttgaatatctgtagttacgttcactaggtaaaaaatactcgaatagtac 840
Query: 2113 ctattccataatataaaagttggtaaagtattttcgctacatacttatt 2161
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ctattccataatataaaagttggtaaagtattttcgctacatacttatt 889
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 238,380
Number of extensions: 4909
Number of successful extensions: 4909
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4909
Number of HSP's successfully gapped: 1
Length of query: 2161
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2144
Effective length of database: 8,119,229
Effective search space: 17407626976
Effective search space used: 17407626976
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)