BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16173 (UTR included)
(2395 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01025B2H09 1475 0.0
BF01033B2C05 1302 0.0
BF14_357_C1 264 6e-70
>BF01025B2H09
Length = 792
Score = 1475 bits (744), Expect = 0.0
Identities = 776/788 (98%), Gaps = 9/788 (1%)
Strand = Plus / Plus
Query: 552 ggcatcaagcagcgcatggaaggttacgctctcgtcaacgcagtacacaacgaaacgcca 611
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 ggcatcaagcagcgtatggaaggttacgctctcgtcaacgcagtacacaacgaaacgcca 64
Query: 612 tcagccatggtggctatggcgaagttgggcatgattatggcctacttctatctatgtgat 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 tcagccatggtggctatggcgaagttgggcatgattatggcctacttctatctatgtgat 124
Query: 672 agaactaatttcttcatgaaggaaaacaaatattattctgaatggagtttttggctaccc 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 agaactaatttcttcatgaaggaaaacaaatattattctgaatggagtttttggctaccc 184
Query: 732 gtcggctatgtgttcgcgttggggctgttctttaccgatgaatctagatccagcag---- 787
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 185 gtcggctatgtgttcgcgttgggactgttctttaccgatgaatctagatccagcagtcat 244
Query: 788 -----ggtgctccatcgcgaacagacgaacgaatggaagggctggatgcagctggtgatt 842
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 tcgagggtgctccatcgcgaacagacgaacgaatggaagggctggatgcagctggtgatt 304
Query: 843 ctggtgtaccaggtcacaggtgccagcaaggtcctgccgatatacatgatggtgagggcg 902
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 305 ctggtgtaccaggtcacaggtgccagtaaggtcctgccgatatacatgatggtgagggcg 364
Query: 903 ctcgtgtcctcgtacctgttcctgaccggatatggtcacttctactacacgtggaagacc 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ctcgtgtcctcgtacctgttcctgaccggatatggtcacttctactacacgtggaagacc 424
Query: 963 ggggacacgggcctcgtgagatacttcagggttatcttcagactgaacttcctgaccgtg 1022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ggggacacgggcctcgtgagatacttcagggttatcttcagactgaacttcctgaccgtg 484
Query: 1023 gtcctctgtctgaccatgaacagaccgtatcagttctacagcttcataccgctggtgtcg 1082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 gtcctctgtctgaccatgaacagaccgtatcagttctacagcttcataccgctggtgtcg 544
Query: 1083 ttttggtacaccttgatgttcgcgattttctcgctgcctcctcaactctctccgcctcat 1142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 ttttggtacaccttgatgttcgcgattttctcgctgcctcctcaactctctccgcctcat 604
Query: 1143 accctggagccttaccagcctgtgtacacagttataaagaccctgggcctgctggcgatg 1202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 accctggagccttaccagcctgtgtacacagttataaagaccctgggcctgctggcgatg 664
Query: 1203 gtgaccgtgctgtacatgagcgaagtgttcttccagaagatcttcctcatgagaccctgg 1262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 gtgaccgtgctgtacatgagcgaagtgttcttccagaagatcttcctcatgagaccctgg 724
Query: 1263 aaggcgctgtttgtgaactccgacgacgacatccgacagtggtggctggactggaaacag 1322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 aaggcgctgtttgtgaactccgacgacgacatccgacagtggtggctggactggaaacag 784
Query: 1323 gaccgcta 1330
||||||||
Sbjct: 785 gaccgcta 792
>BF01033B2C05
Length = 712
Score = 1302 bits (657), Expect = 0.0
Identities = 700/713 (98%), Gaps = 1/713 (0%)
Strand = Plus / Plus
Query: 1342 acggcataatattcgcggcggcttaccttttagcgcagaagtatagcttactggacgaca 1401
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1 acggcataatattcgcggcggcttaccttttagcgcagaagtatagcttgctggacgaca 60
Query: 1402 acaaccacagcaacctgttcacgccgggcatcgcgttgaccgctaccctgctggcgttca 1461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acaaccacagcaacctgttcacgccgggcatcgcgttgaccgctaccctgctggcgttca 120
Query: 1462 tcgcgctcggaagttacataacgttcacatttttctgcaccaacacattcgactgcaacg 1521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcgcgctcggaagttacataacgttcacatttttctgcaccaacacattcgactgcaacg 180
Query: 1522 agatacactcctacgtgacctttctgcccatcatcgggtacatcatattgaggaacgtgt 1581
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agattcactcctacgtgacctttctgcccatcatcgggtacatcatattgaggaacgtgt 240
Query: 1582 ccggcgtgctccgcacgagacattcgagtcttttcgcgtggtttgggaccataacgctcg 1641
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccggcgtgctccgcacgagacactcgagtcttttcgcgtggtttgggaccataacgctcg 300
Query: 1642 aactgttcgccagtcagtcccatatctggttggccgccgatactcacggcgtgttggtcc 1701
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 301 aactgttcgccagtcagtcccatatctggttggccgccgatacccacggcgtgttggtcc 360
Query: 1702 tagttcccggcgtgcccgtcttcaatctgatcctgacctcgtatattttcatattcaccg 1761
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tagttcccggcgtgcctgtcttcaatctgatcctgacctcgtatattttcatattcaccg 420
Query: 1762 cccacgaaatacataaattaacaggaatcattctcccctacgccgttccggacgactggc 1821
||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 421 cccacgaaatacataaattaacaggcatcattctgccctacgccgttccggacgactggc 480
Query: 1822 ggctagttttaaggaattttgctattttcctagcgattttggtaccaattggcatccacg 1881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggctagttttaaggaattttgctattttcctagcgattttggtaccaattggcatccacg 540
Query: 1882 atggtatgttttaagaatatatttctcaacttcatcctcaatacccgtcaaggtcgagag 1941
|||||||||||||||||||||||||| || || ||||||||||||||||||||| ||||
Sbjct: 541 atggtatgttttaagaatatatttct-aaattgatcctcaatacccgtcaaggttcagag 599
Query: 1942 cgcttgcgaaaaaattactttccattacatttcataataacttgtagatagcgaaccggt 2001
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 cgcatgcgaaaaaattactttccattacatttcataataacttgtagatagcgaaccggt 659
Query: 2002 tctcgagtgtgtaggagatatgtatttatttaatttttaattttttatagtat 2054
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 tctcgagtgtgtaggagatatgtatttatttaatttttaattttttatagtat 712
>BF14_357_C1
Length = 1023
Score = 264 bits (133), Expect = 6e-70
Identities = 137/139 (98%)
Strand = Plus / Plus
Query: 2257 ctaaaaatatttttatatcgacgtaatgattttgtaacaaatggtttgtgatataacgta 2316
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 8 ctaaaaatatttttatatcganntaatgattttgtaacaaatggtttgtgatataacgta 67
Query: 2317 ctgtgaacagatctagtacaaataaaaacttaaatgcataatgctatattcgtgatttgc 2376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 ctgtgaacagatctagtacaaataaaaacttaaatgcataatgctatattcgtgatttgc 127
Query: 2377 tatgatataggaactaggg 2395
|||||||||||||||||||
Sbjct: 128 tatgatataggaactaggg 146
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 252,599
Number of extensions: 6088
Number of successful extensions: 6088
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 6087
Number of HSP's successfully gapped: 4
Length of query: 2395
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2378
Effective length of database: 8,119,229
Effective search space: 19307526562
Effective search space used: 19307526562
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)