BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16184 (UTR included)
(3016 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01033B2C10 1162 0.0
BF01058A1H02 910 0.0
BF01035X1C09 80 2e-14
>BF01033B2C10
Length = 678
Score = 1162 bits (586), Expect = 0.0
Identities = 622/634 (98%)
Strand = Plus / Minus
Query: 1952 cataatagtgtatgacattgctggaaacttggagaaagtattggagctgttctgtgtatt 2011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 cataatagtgtatgacattgctggaaacttggagaaagtattggagctgttctgtgtatt 619
Query: 2012 gctggcccaagttgtgagtagtggtggcgcattacgagagcgtctacgttcgctgtccga 2071
||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 618 gctggcccaagttgtgagtagtggtggcgcattacgagagcgtttacgttcgctttccga 559
Query: 2072 gcacgtgtcgcggcgtctccgttcagaagaactgccatctcctcacctggtcgacgctta 2131
||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 558 gcacgtgtcgcggggtttccgttcagaagaactgccatctcctcacctggtggacgctta 499
Query: 2132 caacaaactgtgcaagttgatgacattctttgatcagttccatgctgaaaattacgaagg 2191
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 498 caacaaactgtgcaagttgatgacattctttgatcagttccatgctgaaaattatgaagg 439
Query: 2192 tgccttggagacgatccgcgcttgcgagcttgtacctctaagctcggatgaggtgtcggc 2251
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 438 tgccttggagacgatccgcgcttgcgagcttgtacctttaagctcggatgaggtgtcggc 379
Query: 2252 tcgagtagctggagcgcgaaacgctcgaggcgagctattacgagcacttccggctgtcct 2311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tcgagtagctggagcgcgaaacgctcgaggcgagctattacgagcacttccggctgtcct 319
Query: 2312 acgagcgttatgtcatatcctgcttgctatgaggcagaagctacgtactgcacagcctac 2371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 acgagcgttatgtcatatcctgcttgctatgaggcagaagctacgtactgcacagcctac 259
Query: 2372 cctcagtacacatactgctaataagcaactagaatggctgagagaacaggctgaggtttt 2431
||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 258 cctcagtacacatactgttaataagcaactagaatggttgagagaacaggctgaggtttt 199
Query: 2432 gaatacatttgctgggaacatcgcgtacaggatgcccggtgacacctacagccagctagc 2491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 gaatacatttgctgggaacatcgcgtacaggatgcccggtgacacctacagccagctagc 139
Query: 2492 tcagatgcaagtcctcatgcattgataaataacttgaataaactaaaactaagctaaatg 2551
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 138 tcagatgcaagtcctcatgcattgataaataacttgaataaactaaatttaagctaaatg 79
Query: 2552 ttttattttaataataaagaaatcgtgaaatttt 2585
| ||||||||||||||||||||||||||||||||
Sbjct: 78 tcttattttaataataaagaaatcgtgaaatttt 45
>BF01058A1H02
Length = 470
Score = 910 bits (459), Expect = 0.0
Identities = 462/463 (99%)
Strand = Plus / Plus
Query: 995 gttgacggatggtgtgattgatgatcgtccattgtggcctatggtgtattattgcttgag 1054
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttgacggatggtgtgattgatgatcgtccattgtggcctatggtgtattattgcttgag 60
Query: 1055 aagtggagatgctaatgcagcattacactgtttgaggaaagctggccgagatcacgagga 1114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagtggagatgctaatgcagcattacactgtttgaggaaagctggccgagatcacgagga 120
Query: 1115 atttatagcagctctagaagaatatataagagaacctgagaagccgttaagtgataagtt 1174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atttatagcagctctagaagaatatataagagaacctgagaagccgttaagtgataagtt 180
Query: 1175 acaaacggcaatcaacttccaatacaggattcaagttcgcaactctacagatccctacaa 1234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acaaacggcaatcaacttccaatacaggattcaagttcgcaactctacagatccctacaa 240
Query: 1235 aagagctgtgtacagtgtaatcagatgctgtgatgtcagtgacgaacattcagaagtcgc 1294
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 241 aagagctgtgtacagtgtaatcagatgctgtgatgtcagtgatgaacattcagaagtcgc 300
Query: 1295 ccgtacggccgatgactatctatggcttaaactgtccatcatcaagactcgccctaacaa 1354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccgtacggccgatgactatctatggcttaaactgtccatcatcaagactcgccctaacaa 360
Query: 1355 tgaatctgaatcatttagttattcggacttacagaagatgattttggaagaatatggaga 1414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgaatctgaatcatttagttattcggacttacagaagatgattttggaagaatatggaga 420
Query: 1415 aacccattaccacgcgtatgagaagccccttgtatatttccaa 1457
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aacccattaccacgcgtatgagaagccccttgtatatttccaa 463
>BF01035X1C09
Length = 778
Score = 79.8 bits (40), Expect = 2e-14
Identities = 89/104 (85%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 143 ttcatttaaatgaaacaaaaattttcggattagtatgggttttttattattttaactaga 202
|||||||| |||||| || ||||||| ||| |||| |||||||||||| ||||||| |
Sbjct: 553 ttcatttatatgaaagtaatattttcgc-ttactatgcgttttttattatcttaactaca 611
Query: 203 tactcccaacatttcggttattttgcagcaaccatgatcacggg 246
| ||||||| ||||||||| |||||||||||| ||||||||||
Sbjct: 612 ttatcccaacgtttcggttactttgcagcaaccgtgatcacggg 655
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 348,285
Number of extensions: 7207
Number of successful extensions: 7207
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 7207
Number of HSP's successfully gapped: 3
Length of query: 3016
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2998
Effective length of database: 8,109,745
Effective search space: 24313015510
Effective search space used: 24313015510
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)