BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16185 (UTR included)
(1082 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01046A2E11 496 e-140
BF01033B2C10 82 2e-15
>BF01046A2E11
Length = 747
Score = 496 bits (250), Expect = e-140
Identities = 253/254 (99%)
Strand = Plus / Plus
Query: 518 tttgcgtaaagaattgtattgtgtcttatttccgggtgttgttaagaatgatgaaaaggc 577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38 tttgcgtaaagaattgtattgtgtcttatttccgggtgttgttaagaatgatgaaaaggc 97
Query: 578 tatacagtgtatgggaggtataaaggctctttcacagcattacacccaagctaataaaaa 637
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 98 tatacagtgtatgggaggtataaaggctctttcacagcattacactcaagctaataaaaa 157
Query: 638 acgactgggatttagctttcaaccagataatccttttatgaagaaaatatatgctgacgc 697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 acgactgggatttagctttcaaccagataatccttttatgaagaaaatatatgctgacgc 217
Query: 698 aaaacccaccgccggtgtcctctttaaactaaaggttaagaaaactaaatcgggtaatga 757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 aaaacccaccgccggtgtcctctttaaactaaaggttaagaaaactaaatcgggtaatga 277
Query: 758 ggttaagaaagaag 771
||||||||||||||
Sbjct: 278 ggttaagaaagaag 291
Score = 224 bits (113), Expect = 2e-58
Identities = 134/141 (95%)
Strand = Plus / Plus
Query: 771 ggaacccacgcctctctttataacaccatcaaattttacgaggtcagacaaaccgataac 830
||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 458 ggaacccacgcctctttttataacaccatcaaatattacgagatcagacaaaccgataac 517
Query: 831 atactgctacacagagaaacgctatgtgacaaaggatatgatgaagggcgagtccacaaa 890
||||||||||||||| |||||||||||||||||||||||||||||||| ||||| || ||
Sbjct: 518 atactgctacacagaaaaacgctatgtgacaaaggatatgatgaagggtgagtcgactaa 577
Query: 891 tgacgaagtacataagacaag 911
|||||||||||||||||||||
Sbjct: 578 tgacgaagtacataagacaag 598
Score = 95.6 bits (48), Expect = 1e-19
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 1008 aagacaagctctgaatccatctttagaagaggaatacaatacagtggcaaag 1059
||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 591 aagacaagctctgaatcaatctttagaagaggaatacaatacagtggcaaag 642
>BF01033B2C10
Length = 678
Score = 81.8 bits (41), Expect = 2e-15
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 8 taagctaaatgttttattttaataataaagaaatcgtgaaatttt 52
|||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 89 taagctaaatgtcttattttaataataaagaaatcgtgaaatttt 45
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 173,143
Number of extensions: 3822
Number of successful extensions: 3822
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 3822
Number of HSP's successfully gapped: 4
Length of query: 1082
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1065
Effective length of database: 8,119,229
Effective search space: 8646978885
Effective search space used: 8646978885
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)