BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16194 (UTR included)
(2470 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01026A2H02 1231 0.0
>BF01026A2H02
Length = 770
Score = 1231 bits (621), Expect = 0.0
Identities = 650/661 (98%), Gaps = 3/661 (0%)
Strand = Plus / Plus
Query: 1813 taatgcggaggttacacatagtccacgtcctgggccaggtgctggccgtgttattcctct 1872
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 taatgcggaggttacacatagtccacgtcctgggcnnngtgctggccgtgttattcctct 60
Query: 1873 ggcggttcgtgttcctccgctcagccagtctaagaagtgtttggcgctccatcgtggagc 1932
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggcggttcgtgttcctccgctcagccagtctaagaagtgtttggcgctccatcgtggagc 120
Query: 1933 tgctgacccgcgccgccaggatgctcgccgtcgcttgatgcggcgccgccacccgccacc 1992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgctgacccgcgccgccaggatgctcgccgtcgcttgatgcggcgccgccacccgccacc 180
Query: 1993 ttcactcctgacatcgacactcccgacgtttgacaaccactgtgacgttgacgttgccag 2052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttcactcctgacatcgacactcccgacgtttgacaaccactgtgacgttgacgttgccag 240
Query: 2053 gcccccgcagacccggccgccgcgccgtgtccgggtcgctatctgtataaggcttaagta 2112
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 241 gcccccgcagacccggccgccgcgccgtatccgggtcgctatctgtataaggcttaagta 300
Query: 2113 atcgcttgtgagtcgtcccgcccgcggcgtggggacggtcgtttggtcgttttggttgtc 2172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atcgcttgtgagtcgtcccgcccgcggcgtggggacggtcgtttggtcgttttggttgtc 360
Query: 2173 ttcgggtcgccacacttcgctaggcgttagtatgaattagttcgttcagttccagctcga 2232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttcgggtcgccacacttcgctaggcgttagtatgaattagttcgttcagttccagctcga 420
Query: 2233 tgtgatcgttgagattg---aaaaataataataacgtaaaccgtcaccgacgacggccac 2289
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgtgatcgttgagattgataaaaaataataataacgtaaaccgtcaccgacgacggccac 480
Query: 2290 agattatataagtcgcggatattgttaccgttggtgatgcagtccgttcgtctggtgtga 2349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agattatataagtcgcggatattgttaccgttggtgatgcagtccgttcgtctggtgtga 540
Query: 2350 tctcgggttgtctgtggttcacgacacaaatgtttctgctgccaattatatagttataag 2409
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tctcgggctgtctgtggttcacgacacaaatgtttctgctgccaattatatagttataag 600
Query: 2410 ttgcatttccggcggctcggctcgcttgtatcatatagttgtcaaataaatcgatagtac 2469
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 601 ttgcatttccggcggctcggctcgcttgtatcatatagttgnnnaataaatcgatagtac 660
Query: 2470 a 2470
|
Sbjct: 661 a 661
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 233,674
Number of extensions: 5275
Number of successful extensions: 5275
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5274
Number of HSP's successfully gapped: 1
Length of query: 2470
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2453
Effective length of database: 8,119,229
Effective search space: 19916468737
Effective search space used: 19916468737
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)