BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16234 (UTR included)
(1879 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3166_C1 1031 0.0
>BF14_3166_C1
Length = 1154
Score = 1031 bits (520), Expect = 0.0
Identities = 538/544 (98%)
Strand = Plus / Minus
Query: 415 aggtgtcctttgagttcttacggaaagttctgaatcctgtgttcccatgcaacatgctgt 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1032 aggtgtcctttgagttcttacggaaagttctgaatcctgtgttcccatgcaacatgctgt 973
Query: 475 tgcgagggtattcattgtgtgttctgatggtggatgttgtgtgggtgttggtgaatgcca 534
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 972 tgcgagggtactcattgtgtgttctgatggtggatgttgtgtgggtgttggtgaatgcca 913
Query: 535 catatgctgtaataaaggcagttcatgaggtttttaaacctccaccaatgaaatctgttg 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 912 catatgctgtaataaaggcagttcatgaggtttttaaacctccaccaatgaaatctgttg 853
Query: 595 ataatgaaaaggccatggtgattggttctggaagaggtattggtcgtgatttagccatac 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 852 ataatgaaaaggccatggtgattggttctggaagaggtattggtcgtgatttagccatac 793
Query: 655 aactatcatatcttggagcaacagttatatgtgtggatatcaacgaaataaataatagta 714
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 aactgtcataccttggagcaacagttatatgtgtggatatcaacgaaataaataatagta 733
Query: 715 agactgtagcttacattaaacggaaaggtggagatgcctttatgtacacatgcgatatca 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 agactgtagcttacattaaacggaaaggtggagatgcctttatgtacacatgcgatatca 673
Query: 775 cgaagaaagagaatgttgatgatctagcacaaaaagtgaagactgagttaggttttgtta 834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 cgaagaaagagaatgttgatgatctagcacaaaaagtgaagactgagttaggttttgtta 613
Query: 835 gcatgttgttctattgctgtggcatcccgagccctagatcattactgatggcacccaatg 894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 gcatgttgttctattgctgtggcatcccgagccctagatcattactgatggcacccaatg 553
Query: 895 aagatattcatggaacattagatctgactttaacgtcttacttttggctcatcgataact 954
||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||
Sbjct: 552 aagatattcatggaacattagatctgactttaacgtcttacttttgggtcattgattact 493
Query: 955 ttct 958
||||
Sbjct: 492 ttct 489
Score = 488 bits (246), Expect = e-137
Identities = 246/246 (100%)
Strand = Plus / Minus
Query: 941 gctcatcgataactttctgccggaaatgaaagcgaggaatcatggtcatatagtagccct 1000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gctcatcgataactttctgccggaaatgaaagcgaggaatcatggtcatatagtagccct 317
Query: 1001 gacttcggtagctggactcagttacatcaaagatcagatgccactctgtgtagcacagtt 1060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gacttcggtagctggactcagttacatcaaagatcagatgccactctgtgtagcacagtt 257
Query: 1061 tgctgttcagggtctggctgaatctctgatggaggacctaaggatcaataaaattaatgg 1120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 tgctgttcagggtctggctgaatctctgatggaggacctaaggatcaataaaattaatgg 197
Query: 1121 tgttcatgtcacattgacacacatctatccattcattgtagaggataactctgagtttaa 1180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 tgttcatgtcacattgacacacatctatccattcattgtagaggataactctgagtttaa 137
Query: 1181 tttaaa 1186
||||||
Sbjct: 136 tttaaa 131
Score = 163 bits (82), Expect = 1e-39
Identities = 88/90 (97%)
Strand = Plus / Minus
Query: 1 aagaacgaaaattatcattagttaaattgtcttagataacaaagttgacctagaacctat 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1118 aagaacgaaaattatcattagttaaattgttttagataacaaagttgacctagaacctat 1059
Query: 61 taacaaaagtcgaaattagatactacaggt 90
||||||||||||||||||||||||| ||||
Sbjct: 1058 taacaaaagtcgaaattagatactaaaggt 1029
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 237,152
Number of extensions: 4882
Number of successful extensions: 4882
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4882
Number of HSP's successfully gapped: 3
Length of query: 1879
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1862
Effective length of database: 8,119,229
Effective search space: 15118004398
Effective search space used: 15118004398
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)