BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16235 (UTR included)
(2386 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2923_C1 1544 0.0
>BF14_2923_C1
Length = 1229
Score = 1544 bits (779), Expect = 0.0
Identities = 803/811 (99%)
Strand = Plus / Plus
Query: 994 gtgaaatataccaaaacaaagagctggttatcagaactcaacagcacattttcgtcctgg 1053
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 419 gtgaaatataccaaaacaaagagctggtgatcagaactcaacagcacattttcgtcctgg 478
Query: 1054 gtcaaggtgggtttggtggaccgaggaacagtaaacaggctatagcagtagaagctgttc 1113
||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 479 gtcaaggtgggttcggtggaccgaggaacagtaaacaagctatagcagtagaagctgttc 538
Query: 1114 caaagagatcacctgatgctgtactggaacaaaggacagctgaagatcaagctgctttat 1173
|||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 539 caaagagatcacctgatgctgtactggaacaaaggacagctgaagatcaagccgccttat 598
Query: 1174 acagattgtcaggagatttgaatccactacacattgatcctaatgtggccacagccagcg 1233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 acagattgtcaggagatttgaatccactacacattgatcctaatgtggccacagccagcg 658
Query: 1234 gtcacccgagaccaattctgcatggtcttgcatcactcggtttctcagctagacatgttc 1293
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 659 gtcacccgagaccaattctgcatggtcttgcatcgctcggtttctcagctagacatgttc 718
Query: 1294 tcatgaaatacgcaggaaatgatgcttcaaatgtcaaagctctgaaggctagattcgcca 1353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 tcatgaaatacgcaggaaatgatgcttcaaatgtcaaagctctgaaggctagattcgcca 778
Query: 1354 agccggtgttgccaggacagacgttaattacagaaatgtggttggaaggaaagcgggttc 1413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 agccggtgttgccaggacagacgttaattacagaaatgtggttggaaggaaagcgggttc 838
Query: 1414 acttccagactaagttgaaggagactggcaacattgttattgccagttcctacatggatt 1473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 839 acttccagactaagttgaaggagactggcaacattgttattgccagttcctacatggatt 898
Query: 1474 tgaagaatgttatcaaagacggcgcacctgcatccaaccaaaagatggcagcaccatccg 1533
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 899 tgaagaatgttatcaaagacggtgcacctgcatccaaccaaaagatggcagcaccatccg 958
Query: 1534 cttcgtcgttgaagagtgactctttgtttgccaaaattgaggatggcattaaagctaacc 1593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 959 cttcgtcgttgaagagtgactctttgtttgccaaaattgaggatggcattaaagctaacc 1018
Query: 1594 cggacaaggccaagagtgttggcgctgtttacttgtacaatatcactctcaacggaaaaa 1653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1019 cggacaaggccaagagtgttggcgctgtttacttgtacaatatcactctcaacggaaaaa 1078
Query: 1654 ctgtgaagcagtggactctggatttaaaatcggcattggcagtataccaaggtgaaccta 1713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1079 ctgtgaagcagtggactctggatttaaaatcggcattggcagtataccaaggtgaaccta 1138
Query: 1714 aaagtggtaaagcagatacaacaatgacggtgtcagacgatgaccttatggaaattgctg 1773
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1139 aaagtggtaaagcagatacaacaatgacagtgtcagacgatgaccttatggaaattgctg 1198
Query: 1774 ctggcacactcagccctcaagttgcttacct 1804
|||||||||||||||||||||||||||||||
Sbjct: 1199 ctggcacactcagccctcaagttgcttacct 1229
Score = 553 bits (279), Expect = e-157
Identities = 288/291 (98%)
Strand = Plus / Plus
Query: 699 gaagttacggtcgacctcgtggagaaattacaggactttgaggagcgttgtaagttggat 758
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaagtgacggtcgacctcgtggagaaattacaggactttgaggagcgttgtaagttggat 60
Query: 759 ggtcagaatgagagttactgggggaagtacaagtataactccaaagacctggtctgctac 818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggtcagaatgagagttactgggggaagtacaagtataactccaaagacctggtctgctac 120
Query: 819 gccctaggagttggtgcgtcggtggtgaacccttcagacctcaagttcctatacgagagc 878
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gccctaggagttggtgcttcggtggtgaacccttcagacctcaagttcctatacgagagc 180
Query: 879 cacgagagtttctcagctctacccacattcttcatactccccggtatgttgatggaatca 938
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cacgagagtttctcagctctacccacattcttcatactccccggtatgttgatggaatca 240
Query: 939 cctgtagtgggtaaagcgatgcctccaggaaaatacgctgactttacaaat 989
||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 241 cctgtagtgggtaaagcgatgcctccaggaaaatatgctgactttacaaat 291
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 289,504
Number of extensions: 10438
Number of successful extensions: 10438
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 10438
Number of HSP's successfully gapped: 2
Length of query: 2386
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2369
Effective length of database: 8,119,229
Effective search space: 19234453501
Effective search space used: 19234453501
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)