BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16265 (UTR included)
(1876 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2076_C1 1433 0.0
BF01028B2C05 1168 0.0
BF01052A1B01 68 6e-11
>BF14_2076_C1
Length = 779
Score = 1433 bits (723), Expect = 0.0
Identities = 769/782 (98%), Gaps = 3/782 (0%)
Strand = Plus / Plus
Query: 409 tatgtaactaaatttaaaaatatatatcttatttagagttctgaattacaatattatcat 468
|||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||
Sbjct: 1 tatgtaactaaatttaaaaa-atatatcttatttagagttttgaattacaatattattat 59
Query: 469 aaaaaaattaagaattatcattatatttcaatatggcagacgacgaagcgccctcagata 528
|||| ||||||||| | |||||||||||||||||||||||||||||||||| |||||||
Sbjct: 60 aaaa--attaagaataagcattatatttcaatatggcagacgacgaagcgccttcagata 117
Query: 529 gcagtctcctagtaataattgttgatacgaaccccaaccagcggtatatcaccgaagatc 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 gcagtctcctagtaataattgttgatacgaaccccaaccagcggtatatcaccgaagatc 177
Query: 589 caaaagttttgaccggttgtttagacgcggttatcgcattcgcgaactcccaccttatgc 648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 caaaagttttgaccggttgtttagacgcggttatcgcattcgcgaactcccaccttatgc 237
Query: 649 aaaaatccaggaatcaactagcggttattgggtgtcactttcataaaagtgaatatctgt 708
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 aaaaatccagaaatcaactagcggttattgggtgtcactttcataaaagtgaatatctgt 297
Query: 709 atccatcacctgggaaacccttagatgtgagacaaattgatgggcaatatgaattgttca 768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 atccatcacctgggaaacccttagatgtgagacaaattgatgggcaatatgaattgttca 357
Query: 769 cactcgtagaaaagactattaaaatgagattagtgaatttaataaagagtcaacctcaag 828
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 cactcgtagaaaagactattaaaatgagattagtgaatttaataaagagtcaacctcaag 417
Query: 829 aagaacggccgggtgaatcgctgctggctggagccatggctatggggttatgttttattg 888
||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 418 aagaacggccgggtgaatcactgctggctggagcaatggctatggggttatgttttattg 477
Query: 889 ctagaatgcgtcgtgaacagccgccgggattgcgtatggtgagcagaatgttggtagtga 948
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 478 ctagaatgcgtcgtgaacagccgccgggactgcgtatggtgagcagaatgttggtagtga 537
Query: 949 cggggagctcggacacagccgcgcagtacattaactatatgaatgtattttttactgcac 1008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 cggggagctcggacacagccgcgcagtacattaactatatgaatgtattttttactgcac 597
Query: 1009 agaaacaacaagtgttgttggacgtgtgttcgttggacaaacatctgagcttattacagc 1068
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 598 agaaacaacaagtgttgttggacgtgtgttcgttggacaaacatctgagtttattacagc 657
Query: 1069 agggttgcgacatcacaggaggcttatatttaaaagtaccctcgcttgaaggactcttgc 1128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 agggttgcgacatcacaggaggcttatatttaaaagtaccctcgcttgaaggactcttgc 717
Query: 1129 aatatctattgtgggtttttctgcctgaggccagtgaaagacgggaactggtactgcccg 1188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 aatatctattgtgggtttttctgcctgaggccagtgaaagacgggaactggtactgcccg 777
Query: 1189 gc 1190
||
Sbjct: 778 gc 779
>BF01028B2C05
Length = 706
Score = 1168 bits (589), Expect = 0.0
Identities = 613/621 (98%)
Strand = Plus / Plus
Query: 390 gtagcggtgtgattaaatttatgtaactaaatttaaaaatatatatcttatttagagttc 449
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtagcgctgtgattacatttatgtaactaaatttaaaaatatatatcttatttagagttc 60
Query: 450 tgaattacaatattatcataaaaaaattaagaattatcattatatttcaatatggcagac 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgaattacaatattatcataaaaaaattaagaattatcattatatttcaatatggcagac 120
Query: 510 gacgaagcgccctcagatagcagtctcctagtaataattgttgatacgaaccccaaccag 569
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gacgaagcgccttcagatagcagtctcctagtaataattgttgatacgaaccccaaccag 180
Query: 570 cggtatatcaccgaagatccaaaagttttgaccggttgtttagacgcggttatcgcattc 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cggtatatcaccgaagatccaaaagttttgaccggttgtttagacgcggttatcgcattc 240
Query: 630 gcgaactcccaccttatgcaaaaatccaggaatcaactagcggttattgggtgtcacttt 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcgaactcccaccttatgcaaaaatccaggaatcaactagcggttattgggtgtcacttt 300
Query: 690 cataaaagtgaatatctgtatccatcacctgggaaacccttagatgtgagacaaattgat 749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cataaaagtgaatatctgtatccatcacctgggaaacccttagatgtgagacaaattgat 360
Query: 750 gggcaatatgaattgttcacactcgtagaaaagactattaaaatgagattagtgaattta 809
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 361 gggcaatatgaattgttcacactcgttgaaaagactattaaaatgagattagtgaattta 420
Query: 810 ataaagagtcaacctcaagaagaacggccgggtgaatcgctgctggctggagccatggct 869
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 421 ataaagagtcaacctcaagaagaacggccgggtgaatcactgctggctggagcaatggct 480
Query: 870 atggggttatgttttattgctagaatgcgtcgtgaacagccgccgggattgcgtatggtg 929
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 481 atggggttatgttttattgctagaatgcgtcgtgaacagccgccgggactgcgtatggtg 540
Query: 930 agcagaatgttggtagtgacggggagctcggacacagccgcgcagtacattaactatatg 989
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agcaggatgttggtagtgacggggagctcggacacagccgcgcagtacattaactatatg 600
Query: 990 aatgtattttttactgcacag 1010
|||||||||||||||||||||
Sbjct: 601 aatgtattttttactgcacag 621
>BF01052A1B01
Length = 861
Score = 67.9 bits (34), Expect = 6e-11
Identities = 67/77 (87%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 1741 tattactttaattaaaaaacacaattgactttttaaagagaataattaaaacagtacgac 1800
|||||||||||||| ||||||||| |||||||||||||| | ||| |||||| ||| ||
Sbjct: 377 tattactttaattacaaaacacaactgactttttaaagaaagtaactaaaactgta--ac 434
Query: 1801 tccttcgtaaatcactt 1817
|||||||||||||||
Sbjct: 435 ctcttcgtaaatcactt 451
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 317,331
Number of extensions: 8601
Number of successful extensions: 8601
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 8598
Number of HSP's successfully gapped: 3
Length of query: 1876
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1859
Effective length of database: 8,119,229
Effective search space: 15093646711
Effective search space used: 15093646711
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)