BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16269 (UTR included)
(1651 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01047B2H03 135 2e-31
>BF01047B2H03
Length = 758
Score = 135 bits (68), Expect = 2e-31
Identities = 116/132 (87%)
Strand = Plus / Minus
Query: 529 aaaaagaaataaccacaaaccagcgatcaataggatttgtgagagaactcactagggcta 588
|||||||||||||||||||| ||||| ||| || |||||||||||| || ||||||||
Sbjct: 212 aaaaagaaataaccacaaacgggcgattaattggttttgtgagagaagacattagggcta 153
Query: 589 caaaatcaaacgtcaagccttactctatcattaaagcggcttcggattggactatgatga 648
||| |||||| ||||||||||||||||| ||||||||| ||||||||| ||||| || |
Sbjct: 152 taaagtcaaacatcaagccttactctatccttaaagcggtttcggattgcactataatca 93
Query: 649 tggatacgtatg 660
||||||||||||
Sbjct: 92 tggatacgtatg 81
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 223,107
Number of extensions: 4801
Number of successful extensions: 4801
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4801
Number of HSP's successfully gapped: 1
Length of query: 1651
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1634
Effective length of database: 8,119,229
Effective search space: 13266820186
Effective search space used: 13266820186
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)