BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16272 (UTR included)
(2251 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01039A1A03 1070 0.0
>BF01039A1A03
Length = 717
Score = 1070 bits (540), Expect = 0.0
Identities = 559/564 (99%), Gaps = 1/564 (0%)
Strand = Plus / Plus
Query: 258 ggaaatgctgtcaacttatatctgaaacagtgccaagtatttccaaggacgtgagtttgg 317
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 155 ggaaatgctgtcaacttatatctgaaacagtgccaagtatt-ccaaggacgtgagtttgg 213
Query: 318 aatattgaatagaagcctaaaagaatggagatagtgaaattaagtcttaatgcccctcca 377
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 214 aatattgaatagaagcctaaaaaaatggagatagtgaaattaagtcttaatgcccctcca 273
Query: 378 tacaaaatgtttttgctaataagtttatatttaacgttttttggatcgtgctgcggtgag 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 tacaaaatgtttttgctaataagtttatatttaacgttttttggatcgtgctgcggtgag 333
Query: 438 acaaacgataatcttacggatgtaattgaagtatcatctagcatcgctactctccctagt 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 acaaacgataatcttacggatgtaattgaagtatcatctagcatcgctactctccctagt 393
Query: 498 ttcatgacgtcgccatttactaagcttatccactcaactgcgtctagcgtaaagccatta 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 ttcatgacgtcgccatttactaagcttatccactcaactgcgtctagcgtaaagccatta 453
Query: 558 gggacgacagagcctctcagcacagctactccaacaacaaaggaaagcgttaaaacaacg 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 gggacgacagagcctctcagcacagctactccaacaacaaaggaaagcgttaaaacaacg 513
Query: 618 aaagaattcgccacagagtacccaaccacatcacaaaaagttaccactcaagagtacgtg 677
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 aaagaatacgccacagagtacccaaccacatcacaaaaagttaccactcaagagtacgtg 573
Query: 678 aatacaaggagtacacttaaaagctcaaaaacgccaaagttaagcaatacaaatagtaca 737
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 aatacaaagagtacacttaaaagctcaaaaacgccaaagttaagcaatacaaatagtaca 633
Query: 738 agtcactctataacgcaattgcaagatcgcttgggggctatagactgtgatttgcccgta 797
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 634 agtcactctataacgcaattgcaagatcgcttgggggctatagactgtgatttgccagta 693
Query: 798 ttgccgagggaatctcggctctgg 821
||||||||||||||||||||||||
Sbjct: 694 ttgccgagggaatctcggctctgg 717
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 262,584
Number of extensions: 5213
Number of successful extensions: 5213
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5212
Number of HSP's successfully gapped: 1
Length of query: 2251
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2234
Effective length of database: 8,119,229
Effective search space: 18138357586
Effective search space used: 18138357586
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)