BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16303 (UTR included)
(3658 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01020B2C09 1459 0.0
BF01015A2F01 1132 0.0
>BF01020B2C09
Length = 788
Score = 1459 bits (736), Expect = 0.0
Identities = 766/778 (98%)
Strand = Plus / Plus
Query: 1528 tattaggtaataccaccgccggtcagggtttaactttttttttcaggatcaacggctacc 1587
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 tattaggtaacactaccgccggtcagggtttaactttttttttcaggatcaacggctacc 70
Query: 1588 cgatattcatgaaagggtccaatttgataccaatgaacgtacttccagagatagtggaca 1647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 cgatattcatgaaagggtccaatttgataccaatgaacgtacttccagagatagtggaca 130
Query: 1648 aaagacaaattgatatgcttctctctgctgctgttgaagcgcacatgtcaatgcttagag 1707
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 131 aaagacaaattgatatgcttctctctgctgctgttgaagcgcacatgtcaatgctcagag 190
Query: 1708 tatggggaggaggtttgtatgaatcagattacttctatcagcgctgcgatgaacttggta 1767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 tatggggaggaggtttgtatgaatcagattacttctatcagcgctgcgatgaacttggta 250
Query: 1768 tattggtgtggcaagactttctctttgcttgctccatgtacccaatcgatcgagaattta 1827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tattggtgtggcaagactttctctttgcttgctccatgtacccaatcgatcgagaattta 310
Query: 1828 taaataccgtaaccactgaaatagaacaaaacgtgctccggcttcagcaccatccctcga 1887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 taaataccgtaaccactgaaatagaacaaaacgtgctccggcttcagcaccatccctcga 370
Query: 1888 tagcagtgtgggcgggaaacaatgaaaatgaagccgcgttaattggaaattggtaccata 1947
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 371 tagcagtgtgggcgggaaacaatgaaaatgaagccgcgttaagtggaaattggtaccata 430
Query: 1948 catcatcacaaattgagaagtacaaagcagagtacgttcatttatatgtagacattatta 2007
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 catcatcacaaattgagaagtacaaagcagagtacgttcatttatatgtagacattatta 490
Query: 2008 aacctatagtaaacgcaatcgacccaggaagacgatatctcgtgtcgagtccgtcgaatg 2067
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 aacctatagtaaacgcaatcgacccaggaagacgatatctcgtgtcgagtccgtcgaatg 550
Query: 2068 gaatcaagtcggaggaagaaggattcatgtccaagaatccctacgacccacattacggcg 2127
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 ggatcaagtcggaggaagaaggattcatgtccaagaatccctacgacccacattacggcg 610
Query: 2128 acacgcactattacaattatttagccgacaactggaactttaatatatacccaaagacaa 2187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 acacgcactattacaattatttagccgacaactggaactttaatatatacccaaagacaa 670
Query: 2188 gattcgcctcagagtacgggtttcaatcgttaccttctctgaaaacaatgagaacggcca 2247
||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 671 gattcgcctcagaatacgggtttcaatcgttaccttctctnnnnncaatgagaacggcca 730
Query: 2248 caaataagtccagcgatttcagtgtaaacagcaattacttttaccatcggcagcacag 2305
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 caaatangtccagcgatttcagtgtaaacagcaattacttttaccatcggcagcacag 788
>BF01015A2F01
Length = 595
Score = 1132 bits (571), Expect = 0.0
Identities = 589/595 (98%)
Strand = Plus / Plus
Query: 532 ttttagtgaaaacagaatgcatattgaaatacagtttgggaagcgatcacgcgttgtggc 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttttagtgaaaacagaatgcatattgaaatacagtttgggaagcgatcacgcgttgtggc 60
Query: 592 ttttagaaaataacaaccactctatatctgtggcagcctcagttcccggtggagtgtaca 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttttagaaaataacaaccactctatatctgtggcagcctcagttcccggtggagtgtaca 120
Query: 652 gcgatttgcagaaagctggcattattgatgacatattaaaaggtgacaatgatgtcctca 711
||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcgatttacagaaagctggtattattgatgacatattaaaaggtgacaatgatgtcctca 180
Query: 712 cacgctggatcgcttacgactcttggatttatacagcaagatttaatataagcgaggata 771
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgcgctggatcgcttacgactcttggatttatacagcaagatttaatataagcgaggata 240
Query: 772 atatcaaaactaatgtcgtgcgtttggttctggagggagtggacactgtggcgttcattg 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atatcaaaactaatgtcgtgcgtttggttctggagggagtggacactgtggcgttcattg 300
Query: 832 aaatgaacagaagtccgattggatctacaaataatatgttcgttaaatacgtatttgatg 891
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaatgaacggtagtccgattggatctacaaataatatgttcgttaaatacgtatttgatg 360
Query: 892 ttaagcggcatattaaggcaggtgaaaatgaacttaaatttgtattcgaatcccctgtcg 951
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttaagcagcatattaaggcaggtgaaaatgaacttaaatttgtattcgaatcccctgtcg 420
Query: 952 aatactcgaagacccgttcgaataacaatttcatagcaccagactgcgttcctagcatat 1011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aatactcgaagacccgttcgaataacaatttcatagcaccagactgcgttcctagcatat 480
Query: 1012 acaatggggaatgtcacgcgaatcaaatcagaaagatgcaggcctcttttggttgggact 1071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 acaatggggaatgtcacgcgaatcaaatcagaaagatgcaggcctcttttggttgggact 540
Query: 1072 ggggaccggcgtttccctctgtgggcatttggcgaccgatatatttggaatgttt 1126
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ggggaccggcgtttccctctgtgggcatttggcgaccgatatatttggaatgttt 595
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 481,203
Number of extensions: 9613
Number of successful extensions: 9613
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 9613
Number of HSP's successfully gapped: 2
Length of query: 3658
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3640
Effective length of database: 8,109,745
Effective search space: 29519471800
Effective search space used: 29519471800
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)