BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16306 (UTR included)
(1597 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01038B1F01 1552 0.0
>BF01038B1F01
Length = 865
Score = 1552 bits (783), Expect = 0.0
Identities = 809/817 (99%), Gaps = 3/817 (0%)
Strand = Plus / Plus
Query: 1 acattttagaaaataaaatgttgtttaagttcttttacaggtctaggtcttcaacacaac 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 acattttagaaaataaaattttgtttaagttcttttacaggtctaggtcttcaacacaac 72
Query: 61 atattcttatcaaaaggtacaacaacaacatgtgagtaataaaaattattatttttaaca 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 73 atattcttatcaaaaggtacaacaacaacatgtgagtaataaaaataattatttttaaca 132
Query: 121 ttagttcccacttaactagcattttgtagtgcctacacatcaaagactcagtttccactt 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 133 ttagttcccacttaactagcattttatagtgcctacacatcaaagactcagtttccactt 192
Query: 181 tttttaagttgtctacggtttctagattgtctcgaataatagacaattgacaggtaatgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 193 tttttaagttgtctacggtttctagattgtctcgaataatagacaattgacagataatgc 252
Query: 241 tgatgtcaacagtgaaatgtactgaatgtattgcagtgtggccttaaatttggactcaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 tgatgtcaacagtgaaatgtactgaatgtattgcagtgtggccttaaatttggactcaat 312
Query: 301 agtcaatacaatcttagaaagattgtatatactctatctgattaataagtgacacccggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 agtcaatacaatcttagaaagattgtatatactctatctgattaataagtgacacccggt 372
Query: 361 aatcacaccttgttaacatgcctttagagtcagaactatcttttcgcgggaacgatcctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 aatcacaccttgttaacatgcctttagagtcagaactatcttttcgcgggaacgatcctg 432
Query: 421 gcgcagctaaatatggcaactttataaactattatactttccatagttgcaaagaaagga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gcgcagctaaatatggcaactttataaactattatactttccatagttgcaaagaaagga 492
Query: 481 ctgataatttgagagcgtctatgtttccaaatgtaacagatgaaattattttatgcttag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 ctgataatttgagagcgtctatgtttccaaatgtaacagatgaaattattttatgcttag 552
Query: 541 acatcggttgcaatacaggagaattaacggttgaattgttttcaacattaacgaagacat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 acatcggttgcaatacaggagaattaacggttgaattgttttcaacattaacgaagacat 612
Query: 601 atcctaaatcagaaataaaaatcttagcagtagacattgatccgacattaatacacaggg 660
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 atcccaaatcagaaataaaaatcttagcagtagacattgatccgacattaatacacaggg 672
Query: 661 ctcaagaaatgtttaatcataacagtaatataacttttatgactttggacatattgaaag 720
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 ctcaagaaatgtttaatcataacagtaatataacttttatgactttggacatattga--- 729
Query: 721 atgatggacataatgcgcttcagacgtttttgcattctcacaataaacaattatttgaca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 atgatggacataatgcgcttcagacgtttttgcattctcacaataaacaattatttgaca 789
Query: 781 taattttctgtttttctgtaactatgtggatacatat 817
|||||||||||||||||||||||||||||||||||||
Sbjct: 790 taattttctgtttttctgtaactatgtggatacatat 826
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 244,641
Number of extensions: 9854
Number of successful extensions: 9854
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9853
Number of HSP's successfully gapped: 1
Length of query: 1597
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1580
Effective length of database: 8,119,229
Effective search space: 12828381820
Effective search space used: 12828381820
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)