BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16307 (UTR included)
(2281 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01023A2A12 109 2e-23
BF01037B1H08 98 8e-20
BF01056B1D02 86 3e-16
BF01062A1A05 74 1e-12
>BF01023A2A12
Length = 723
Score = 109 bits (55), Expect = 2e-23
Identities = 130/155 (83%)
Strand = Plus / Plus
Query: 2019 aggaaaacttcgtgaggaaatctcgagttataattgcaaattacaagtctgaaatagcca 2078
|||| ||| ||||||||||| || | |||||||| ||||||| |||| |||||| |||
Sbjct: 187 aggagaacgtcgtgaggaaacctggtcttataatttcaaattataagtttgaaatcacca 246
Query: 2079 atctgccatgctcaagagtagtgattaatgccctaaccttctccatgtgagaagaggcct 2138
||| ||| || | || || ||||||||||| |||||||||||||||||| |||||||||
Sbjct: 247 atcagccttgagcgagcgtggtgattaatgctctaaccttctccatgtgataagaggcct 306
Query: 2139 ttgctcagctgtaggcaccaataggctgatgatga 2173
||||||||| || || || |||||||||||||||
Sbjct: 307 ttgctcagcagtgagctccgataggctgatgatga 341
>BF01037B1H08
Length = 758
Score = 97.6 bits (49), Expect = 8e-20
Identities = 70/77 (90%)
Strand = Plus / Plus
Query: 2103 ttaatgccctaaccttctccatgtgagaagaggcctttgctcagctgtaggcaccaatag 2162
||||||| |||||||||| ||||||||||||||||||||||||||||| ||| || ||||
Sbjct: 275 ttaatgctctaaccttctacatgtgagaagaggcctttgctcagctgtgggctccgatag 334
Query: 2163 gctgatgatgacgataa 2179
||||||| ||| |||||
Sbjct: 335 gctgatggtgatgataa 351
>BF01056B1D02
Length = 778
Score = 85.7 bits (43), Expect = 3e-16
Identities = 126/153 (82%), Gaps = 3/153 (1%)
Strand = Plus / Plus
Query: 2019 aggaaaacttcgtgaggaaatctcgagttataattgcaaattacaagtctgaaatagcca 2078
|||||||| ||||||||||| || | |||||||| ||||||| ||| |||||| ||||
Sbjct: 588 aggaaaacgtcgtgaggaaacctggtcttataatttcaaattataagattgaaatcgcca 647
Query: 2079 atctgccatgctcaagagtagtgattaatgccctaaccttctccatgtgagaagaggcct 2138
| | | | || |||| || ||| ||||||| ||||||||| ||||||||||||||||
Sbjct: 648 acccgtcttgagcaagcgtggtggttaatgctctaaccttc---atgtgagaagaggcct 704
Query: 2139 ttgctcagctgtaggcaccaataggctgatgat 2171
||||||||| || ||| || |||||||||||||
Sbjct: 705 ttgctcagcagtgggctccgataggctgatgat 737
>BF01062A1A05
Length = 777
Score = 73.8 bits (37), Expect = 1e-12
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 2099 gtgattaatgccctaaccttctccatgtgagaagaggcctttgct 2143
||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 528 gtgattaatgctctaaccttctccttgtgagaagaggcctttgct 572
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 373,293
Number of extensions: 9000
Number of successful extensions: 9000
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 8999
Number of HSP's successfully gapped: 4
Length of query: 2281
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2264
Effective length of database: 8,119,229
Effective search space: 18381934456
Effective search space used: 18381934456
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)