BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16310 (UTR included)
(1687 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1991_C1 1511 0.0
>BF14_1991_C1
Length = 774
Score = 1511 bits (762), Expect = 0.0
Identities = 771/774 (99%)
Strand = Plus / Plus
Query: 376 tgagggaatgtggctatgtttttatcgacggaatgtaataattaaattacaaattactta 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgagggaatgtggctatgtttttatcgacggaatgtaataattaaattacaaattactta 60
Query: 436 agtaaatgagataagaaccattattttacaaatattgtttggaaatatagaagtagacaa 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agtaaatgagataagaaccattattttacaaatattgtttggaaatatagaagtagacaa 120
Query: 496 aaataatgaagatttggacctctgaacataccttcaaccatccttgggaaaccgtcgcac 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaataatgaagatttggacctctgaacataccttcaaccatccttgggaaaccgtcgcac 180
Query: 556 aggcggcatggagaaaatatccaaatcccatgaacccagctgtcatcggaattgatgtag 615
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 181 aggcggcatggagaaaatatcccaatcccatgaacccagctgtcatcggaattgatgtag 240
Query: 616 tcgacaggaaagttgtagatggagtattacatactcatagactcgttagttccaaatggt 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcgacaggaaagttgtagatggagtattacatactcatagactcgttagttccaaatggt 300
Query: 676 tttttccacgatgggcacaagcacttattggcacagctaaaatatgctatgccagtgaaa 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tttttccacgatgggcacaagcacttattggcacagctaaaatatgctatgccagtgaaa 360
Query: 736 agtcagaagtaaatcccgataagcgtgtcatgacattaaaaactgcaaatctaaccttct 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agtcagaagtaaatcccgataagcgtgtcatgacattaaaaactgcaaatctaaccttct 420
Query: 796 gccgttatatagctgttgatgaaactgtgaaatatactcctcatccatcagacccatcaa 855
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 421 gccgttatatagctgttgatgaaactgtgaagtatactcctcatccatcagacccatcaa 480
Query: 856 aaacgctgctgacacaggaagctgtagttacagtggagggtgtaccacttagcagctaca 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aaacgctgctgacacaggaagctgtagttacagtggagggtgtaccacttagcagctaca 540
Query: 916 tggaagatttattagcaaataaaatatcactgaatgctggtaaagggcgtcaagctattg 975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tggaagatttattagcaaataaaatatcactgaatgctggtaaagggcgtcaagctattg 600
Query: 976 aatgggtgattggtaaactggactctgaaataaaagaattggcaaactcagcatgcaaga 1035
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 601 aatgggtgattggtaaactggactctgaaatcaaagaattggcaaactcagcatgcaaga 660
Query: 1036 gcaccgatgaattgcttcaccagacaaaaaagtcactcgatgacatcacaacaactgcca 1095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gcaccgatgaattgcttcaccagacaaaaaagtcactcgatgacatcacaacaactgcca 720
Query: 1096 gaagatcaatggacgatatatcatccaaagctaagaaatcattagatgacatag 1149
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gaagatcaatggacgatatatcatccaaagctaagaaatcattagatgacatag 774
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 236,206
Number of extensions: 5834
Number of successful extensions: 5834
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5834
Number of HSP's successfully gapped: 1
Length of query: 1687
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1670
Effective length of database: 8,119,229
Effective search space: 13559112430
Effective search space used: 13559112430
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)