BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16311 (UTR included)
(2200 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_219_C1 1719 0.0
BF01061A1C06 557 e-158
BF01049B2F08 107 8e-23
BF01024A1H11 88 7e-17
BF14_1793_C1 78 7e-14
>BF14_219_C1
Length = 878
Score = 1719 bits (867), Expect = 0.0
Identities = 873/875 (99%)
Strand = Plus / Plus
Query: 464 gtcgcacaggaaattttcggcacctcgccatgggtccatgggattctatcccaagaaaag 523
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 gtcgcacaggaaattctcggcacctcgccatgggtccatgggattctatcccaagaaaag 63
Query: 524 gtcccgccgtcatcgtggtaaggttaaggccttccccaaggatgatgccagcaagccggt 583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 gtcccgccgtcatcgtggtaaggttaaggccttccccaaggatgatgccagcaagccggt 123
Query: 584 acatcttacagccttcattggttataaggctggtatgacccacgtggtccgtgaacccga 643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 acatcttacagccttcattggttataaggctggtatgacccacgtggtccgtgaacccga 183
Query: 644 ccgtcctggttcaaagattaacaagaaggagattgtggaggctgtgacaatcattgaaac 703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 ccgtcctggttcaaagattaacaagaaggagattgtggaggctgtgacaatcattgaaac 243
Query: 704 tcctccgatggtctgtgttggtgttgtcggttacatcgagactccacatggtctccgcgc 763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tcctccgatggtctgtgttggtgttgtcggttacatcgagactccacatggtctccgcgc 303
Query: 764 tctcctgacggtttgggctgaacatatgtccgaggactgccgtcgtcgcttctacaagaa 823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 tctcctgacggtttgggctgaacatatgtccgaggactgccgtcgtcgcttctacaagaa 363
Query: 824 ctggtataagtgtaagaagaaggccttcaccaagtccagcaagaaatggcaggatgagct 883
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ctggtataagtgtaagaagaaggccttcaccaagtccagcaagaaatggcaggatgagct 423
Query: 884 tggacgtaaatccattgagaaggacttcaagaaaatgatccgttactgtagtgtaatcag 943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tggacgtaaatccattgagaaggacttcaagaaaatgatccgttactgtagtgtaatcag 483
Query: 944 agttattgcacacactcaaatgaagctgttgaagcagcgtcaaaagaaggcccatatcat 1003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 agttattgcacacactcaaatgaagctgttgaagcagcgtcaaaagaaggcccatatcat 543
Query: 1004 ggaaatccaagttaacggtgggtctattgaagacaaagttaattgggccagagaacattt 1063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 ggaaatccaagttaacggtgggtctattgaagacaaagttaattgggccagagaacattt 603
Query: 1064 ggagaagcctattccaattgactctgtttttgctcaggatgagatgattgactgcatcgg 1123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 ggagaagcctattccaattgactctgtttttgctcaggatgagatgattgactgcatcgg 663
Query: 1124 tgtgactaaaggaaagggatacaaaggtgtcacctcccgttggcacacaaagaagttgcc 1183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 tgtgactaaaggaaagggatacaaaggtgtcacctcccgttggcacacaaagaagttgcc 723
Query: 1184 gcgtaagacccacaagggtctgcgtaaggtcgcttgtattggagcgtggcatccttcaag 1243
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 724 gcgtaagacccacaagggtctgcgtaaggtcgcttgtattggagcgtggcatccctcaag 783
Query: 1244 agtttcattcactgtggctcgtgctggtcaaaagggctatcaccaccgcactgaaatgaa 1303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 agtttcattcactgtggctcgtgctggtcaaaagggctatcaccaccgcactgaaatgaa 843
Query: 1304 caagaagatctacagaattggacaaggtattcaca 1338
|||||||||||||||||||||||||||||||||||
Sbjct: 844 caagaagatctacagaattggacaaggtattcaca 878
>BF01061A1C06
Length = 312
Score = 557 bits (281), Expect = e-158
Identities = 287/289 (99%)
Strand = Plus / Plus
Query: 1445 tgacttcatcatgatcaagggttgctgcatgggtcccaagaagcgcgttatcaccttaag 1504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgacttcatcatgatcaagggttgctgcatgggtcccaagaagcgcgttatcaccttaag 60
Query: 1505 aaaatcactccgcgtccacacgaagagggcagctcttgagaagatcaacctcaagttcat 1564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaaatcactccgcgtccacacgaagagggcagctcttgagaagatcaacctcaagttcat 120
Query: 1565 tgacaccgcgtctaagtttggtcacggtcgcttccagacgccggctgacaaggccgcgtt 1624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgacaccgcgtctaagtttggtcacggtcgcttccagacgccggctgacaaggccgcgtt 180
Query: 1625 catgggcacgctcaagaaggatcgcgtccgcgaagacgccgccaatgcagctgcaccggc 1684
||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 181 catgggcacgctcaagaaggatcgcgttcgcgaagatgccgccaatgcagctgcaccggc 240
Query: 1685 tgcagctcagtcttagactgctgggcttataaataaagttgtaatataa 1733
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgcagctcagtcttagactgctgggcttataaataaagttgtaatataa 289
>BF01049B2F08
Length = 791
Score = 107 bits (54), Expect = 8e-23
Identities = 54/54 (100%)
Strand = Plus / Minus
Query: 2147 agggcgcattttcattggtcgataagtcggtagttagcccgattgcggggagta 2200
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 agggcgcattttcattggtcgataagtcggtagttagcccgattgcggggagta 712
>BF01024A1H11
Length = 787
Score = 87.7 bits (44), Expect = 7e-17
Identities = 47/48 (97%)
Strand = Plus / Plus
Query: 2153 cattttcattggtcgataagtcggtagttagcccgattgcggggagta 2200
||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 485 cattttcattggtcgataagtcggtagttagcccgattgcgggaagta 532
>BF14_1793_C1
Length = 1130
Score = 77.8 bits (39), Expect = 7e-14
Identities = 39/39 (100%)
Strand = Plus / Minus
Query: 2149 ggcgcattttcattggtcgataagtcggtagttagcccg 2187
|||||||||||||||||||||||||||||||||||||||
Sbjct: 966 ggcgcattttcattggtcgataagtcggtagttagcccg 928
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 252,684
Number of extensions: 5358
Number of successful extensions: 5358
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 5358
Number of HSP's successfully gapped: 5
Length of query: 2200
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2183
Effective length of database: 8,119,229
Effective search space: 17724276907
Effective search space used: 17724276907
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)