BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16319 (UTR included)
(1282 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01052B1F12 109 1e-23
BF01012A1E04 109 1e-23
BF01025B2E05 103 7e-22
BF01012A1B09 103 7e-22
BF01056A1B08 100 1e-20
BF14_335_C2 100 1e-20
BF01047B2H03 94 7e-19
BF14_729_C2 94 7e-19
BF01011A1H06 92 3e-18
BF01058B2C06 86 2e-16
BF01049B2H03 80 1e-14
BF01050A2E08 78 4e-14
BF01025A1D01 72 2e-12
BF01055B2A04 68 4e-11
BF01049A2D11 68 4e-11
>BF01052B1F12
Length = 785
Score = 109 bits (55), Expect = 1e-23
Identities = 61/63 (96%)
Strand = Plus / Plus
Query: 147 atgagatctaagactttcgcgagttttattcatttaaatgaaactaatatttttcggata 206
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 atgaaatctaagaatttcgcgagttttattcatttaaatgaaactaatatttttcggata 356
Query: 207 tac 209
|||
Sbjct: 357 tac 359
>BF01012A1E04
Length = 841
Score = 109 bits (55), Expect = 1e-23
Identities = 62/63 (98%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 148 tgagatctaagactttcgcgagttttattcatttaaatgaaactaatat-ttttcggata 206
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 618 tgagatctaagactttcgcgagttttattcatttaaatgaaactaatatattttcggata 559
Query: 207 tac 209
|||
Sbjct: 558 tac 556
>BF01025B2E05
Length = 759
Score = 103 bits (52), Expect = 7e-22
Identities = 62/64 (96%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 145 taatgagatctaagactttcgcgagttttattcatttaaatgaaactaatat-ttttcgg 203
|||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 121 taatgagatctaagactttcgcgagttttattcatttaaatgaaactagtatattttcgg 62
Query: 204 atat 207
||||
Sbjct: 61 atat 58
>BF01012A1B09
Length = 841
Score = 103 bits (52), Expect = 7e-22
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 147 atgagatctaagactttcgcgagttttattcatttaaatgaaactaatatttttcggata 206
||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 705 atgagatctaagactgtcgcgagttttattcatttaaatgaaactaatatatttcggata 764
>BF01056A1B08
Length = 761
Score = 99.6 bits (50), Expect = 1e-20
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 147 atgagatctaagactttcgcgagttttattcatttaaatgaaactaatat 196
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 atgagatctaagactttcgcgagttttattcatttaaatgaaactaatat 145
>BF14_335_C2
Length = 1827
Score = 99.6 bits (50), Expect = 1e-20
Identities = 101/118 (85%)
Strand = Plus / Minus
Query: 466 acatatttatgtattcgcaaattttaaagcgcattatgataatagagcttacggttgctt 525
|||||||| ||||||||| ||||||||||||| || | ||||||||| ||||||| |||
Sbjct: 1277 acatatttctgtattcgcgaattttaaagcgcgctacgctaatagagcctacggttcctt 1218
Query: 526 gggaaaccaacatccacaaagaccatgccatcaaggttaatatatattacgagctcac 583
|| | |||||||||| |||| |||||||||||||||| || | ||||| ||||||||
Sbjct: 1217 ggaagaccaacatccccaaaaaccatgccatcaaggtcaacaagtattatgagctcac 1160
>BF01047B2H03
Length = 758
Score = 93.7 bits (47), Expect = 7e-19
Identities = 124/147 (84%), Gaps = 2/147 (1%)
Strand = Plus / Minus
Query: 349 caaacgtcaagccctactctatccttaaagcgacttcggattggactctaatgatggata 408
||||| ||||||| |||||||||||||||||| ||||||||| ||| |||| |||||||
Sbjct: 146 caaacatcaagccttactctatccttaaagcggtttcggattgcactataatcatggata 87
Query: 409 cgtatgagaaacaatacgaaatcccacaggatatttgtgcgtcagccttcagaccagaca 468
|||||| | ||| |||| ||||||| || ||| ||||| ||| | | |||||||||||
Sbjct: 86 cgtatggggaacgatacaaaatccccgagcata-ttgtgtgtcggtttccagaccagaca 28
Query: 469 ta-tttatgtattcgcaaattttaaag 494
|| ||||| ||||||| ||||||||||
Sbjct: 27 tattttatatattcgcgaattttaaag 1
>BF14_729_C2
Length = 1289
Score = 93.7 bits (47), Expect = 7e-19
Identities = 74/83 (89%)
Strand = Plus / Plus
Query: 249 gtaaccgaaacgtcgggagtatatagttttaaccaaaaataaagcacgcgtagtatttcc 308
|||||||||||||||||||||| ||||||| | ||||||||||||||||||||| | |||
Sbjct: 560 gtaaccgaaacgtcgggagtatgtagtttttaacaaaaataaagcacgcgtagtttatcc 619
Query: 309 gaaaaatattaatttcatttaaa 331
||| ||| || |||||||||||
Sbjct: 620 gaataattctagtttcatttaaa 642
Score = 83.8 bits (42), Expect = 6e-16
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 145 taatgagatctaagactttcgcgagttttattcatttaaatgaaactaatatttttcgga 204
|||||||||||||||||||||| ||||||| ||||||||||||||||| ||| ||||||
Sbjct: 676 taatgagatctaagactttcgccagttttaatcatttaaatgaaactagaattattcgga 617
Query: 205 ta 206
||
Sbjct: 616 ta 615
>BF01011A1H06
Length = 739
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 145 taatgagatctaagactttcgcgagttttattcatttaaatgaaactaatatttttcgga 204
||||||||||||||| |||||||| ||||||||||||||||||| ||| |||||||||||
Sbjct: 608 taatgagatctaagattttcgcgacttttattcatttaaatgaatctagtatttttcgga 549
Query: 205 ta 206
||
Sbjct: 548 ta 547
Score = 77.8 bits (39), Expect = 4e-14
Identities = 72/83 (86%)
Strand = Plus / Plus
Query: 249 gtaaccgaaacgtcgggagtatatagttttaaccaaaaataaagcacgcgtagtatttcc 308
|||||||||||||||||||||| |||| || |||||||||| |||||||||| | |||
Sbjct: 492 gtaaccgaaacgtcgggagtatgtagtcttttacaaaaataaatcacgcgtagtttatcc 551
Query: 309 gaaaaatattaatttcatttaaa 331
|||||||| || ||||||||||
Sbjct: 552 gaaaaatactagattcatttaaa 574
>BF01058B2C06
Length = 772
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 249 gtaaccgaaacgtcgggagtatatagttttaaccaaaaataaagcacgcgtagta 303
|||||||||||||||||| ||| |||||||||| |||||||||||||||||||||
Sbjct: 450 gtaaccgaaacgtcgggaatatgtagttttaacaaaaaataaagcacgcgtagta 396
>BF01049B2H03
Length = 832
Score = 79.8 bits (40), Expect = 1e-14
Identities = 57/62 (91%), Gaps = 3/62 (4%)
Strand = Plus / Minus
Query: 144 ataatgagatctaagactttcgcgagttttattcatttaaatgaaactaatatttttcgg 203
|||||||||||||||| ||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 355 ataatgagatctaagattttagcgagt---attcatttaaatgaaactaatatttttcgg 299
Query: 204 at 205
||
Sbjct: 298 at 297
>BF01050A2E08
Length = 813
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 249 gtaaccgaaacgtcgggagtatatagttttaaccaaaaataaagcacgcgtagtatttcc 308
|||||||||||||||||||||| |||||||| |||||||||| |||| ||||||| | |
Sbjct: 150 gtaaccgaaacgtcgggagtatggagttttaaacaaaaataaatcacgtgtagtatatac 209
Query: 309 gaaaaatatta 319
| |||||||||
Sbjct: 210 ggaaaatatta 220
>BF01025A1D01
Length = 764
Score = 71.9 bits (36), Expect = 2e-12
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 174 attcatttaaatgaaactaatatttttcggatatac 209
||||||||||||||||||||||||||||||||||||
Sbjct: 369 attcatttaaatgaaactaatatttttcggatatac 404
>BF01055B2A04
Length = 830
Score = 67.9 bits (34), Expect = 4e-11
Identities = 99/120 (82%), Gaps = 3/120 (2%)
Strand = Plus / Minus
Query: 505 taatagagcttacggttgcttgggaaaccaacatccacaaagaccatgccatcaaggtta 564
|||||||||||||| || | ||| |||||||||||| |||||||| ||||| | |||| |
Sbjct: 543 taatagagcttacgattccctggaaaaccaacatccccaaagaccgtgccaccgaggtca 484
Query: 565 atatatattacgagctcacaaacaaactcgctagaaataggttcgtcgtagatttgtaca 624
||| | ||| ||||||| ||| ||||| |||| ||||| ||||||||| | |||||||
Sbjct: 483 ata---agtacaagctcactaacgaactcactaggaatagattcgtcgtaaacttgtaca 427
>BF01049A2D11
Length = 776
Score = 67.9 bits (34), Expect = 4e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 143 gataatgagatctaagactttcgcgagttttattcatt 180
||||||||||||||||| ||||||||||||||||||||
Sbjct: 465 gataatgagatctaagattttcgcgagttttattcatt 502
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 182,083
Number of extensions: 3810
Number of successful extensions: 3810
Number of sequences better than 1.0e-10: 15
Number of HSP's gapped: 3808
Number of HSP's successfully gapped: 17
Length of query: 1282
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1265
Effective length of database: 8,119,229
Effective search space: 10270824685
Effective search space used: 10270824685
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)