BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16321 (UTR included)
(1118 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01031A2H05 916 0.0
BF01015B2B08 416 e-116
BF01042A2F12 283 3e-76
>BF01031A2H05
Length = 687
Score = 916 bits (462), Expect = 0.0
Identities = 471/474 (99%)
Strand = Plus / Plus
Query: 576 gaaatccgcgattccttaaatatctgggtctcaggaccccataaggaaaatcttgaacat 635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 gaaatccgcgattccttaaatatctgggtctcaggaccccataaggaaaatcttgaacat 114
Query: 636 tggaaacaatatggtgcgaatgtaacaactagcaatggagaagttatttgtaattgtgat 695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 tggaaacaatatggtgcgaatgtaacaactagcaatggagaagttatttgtaattgtgat 174
Query: 696 atagtattcattggagtgaaacctgcaatgctggataatgctttatgtaattgctactta 755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 atagtattcattggagtgaaacctgcaatgctggataatgctttatgtaattgctactta 234
Query: 756 cctacaaaagatcctaaaaatattctgttcatatctatgcttgctggagtgaacatacaa 815
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 235 cctacaaaagatcctaaaaatattctgttcatatctatgcttgctggagtgaacattcaa 294
Query: 816 aaattgaaacaggtgttgaagcagttgccttttaattccaatgtgatccgtatttttcca 875
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 295 aaattgaaacaggtgttgaagcagttgccttttaattccaatgtaatccgtatttttcca 354
Query: 876 aacacacctatgtcggtgggcgctggttcatgtttatatgccatagatgaaaatgtaact 935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 aacacacctatgtcggtgggcgctggttcatgtttatatgccatagatgaaaatgtaact 414
Query: 936 ctagaacagtgtgctgttttggagaaattactagccggctgtggactgtgtgaaaaagtt 995
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 ctagaacaatgtgctgttttggagaaattactagccggctgtggactgtgtgaaaaagtt 474
Query: 996 tctgaaccattgatggactccttgggaattctgacaggatgtggacctgcattt 1049
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 tctgaaccattgatggactccttgggaattctgacaggatgtggacctgcattt 528
>BF01015B2B08
Length = 741
Score = 416 bits (210), Expect = e-116
Identities = 216/218 (99%)
Strand = Plus / Plus
Query: 828 gtgttgaagcagttgccttttaattccaatgtgatccgtatttttccaaacacacctatg 887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gtgttgaagcagttgccttttaattccaatgtgatccgtatttttccaaacacacctatg 386
Query: 888 tcggtgggcgctggttcatgtttatatgccatagatgaaaatgtaactctagaacagtgt 947
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 387 tcagtgggcgctggttcatgtttatatgccatagatgaaaatgtaactctagaacaatgt 446
Query: 948 gctgttttggagaaattactagccggctgtggactgtgtgaaaaagtttctgaaccattg 1007
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gctgttttggagaaattactagccggctgtggactgtgtgaaaaagtttctgaaccattg 506
Query: 1008 atggactccttgggaattctgacaggatgtggacctgc 1045
||||||||||||||||||||||||||||||||||||||
Sbjct: 507 atggactccttgggaattctgacaggatgtggacctgc 544
Score = 333 bits (168), Expect = 4e-91
Identities = 168/168 (100%)
Strand = Plus / Plus
Query: 576 gaaatccgcgattccttaaatatctgggtctcaggaccccataaggaaaatcttgaacat 635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 gaaatccgcgattccttaaatatctgggtctcaggaccccataaggaaaatcttgaacat 220
Query: 636 tggaaacaatatggtgcgaatgtaacaactagcaatggagaagttatttgtaattgtgat 695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 tggaaacaatatggtgcgaatgtaacaactagcaatggagaagttatttgtaattgtgat 280
Query: 696 atagtattcattggagtgaaacctgcaatgctggataatgctttatgt 743
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 atagtattcattggagtgaaacctgcaatgctggataatgctttatgt 328
>BF01042A2F12
Length = 768
Score = 283 bits (143), Expect = 3e-76
Identities = 143/143 (100%)
Strand = Plus / Minus
Query: 434 tttcggtaaatctcgtatatgatttgcatctagaaaaagttcctccaaactcctggaata 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 tttcggtaaatctcgtatatgatttgcatctagaaaaagttcctccaaactcctggaata 227
Query: 494 tcgtaaaatgtcttcaggtactgttggcaaggagcaatgccgcttgtctacacattccac 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 tcgtaaaatgtcttcaggtactgttggcaaggagcaatgccgcttgtctacacattccac 167
Query: 554 ttggcgattacatttgaacaaag 576
|||||||||||||||||||||||
Sbjct: 166 ttggcgattacatttgaacaaag 144
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 176,952
Number of extensions: 3779
Number of successful extensions: 3779
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 3779
Number of HSP's successfully gapped: 4
Length of query: 1118
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1101
Effective length of database: 8,119,229
Effective search space: 8939271129
Effective search space used: 8939271129
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)