BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16332 (UTR included)
(1936 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01044B2A07 955 0.0
>BF01044B2A07
Length = 812
Score = 955 bits (482), Expect = 0.0
Identities = 499/506 (98%)
Strand = Plus / Plus
Query: 465 ggaacgatgaactcttacccctgagggttgtgagctatggcgcgtgctacaaccgcctgc 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ggaacgatgaactcttacccctgagggttgtgagctatggcgcgtgctacaaccgcctgc 366
Query: 525 ctctttacggtccattttctctcgtgcattattgtatgtcatcaagatagtagcagcaac 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ctctttacggtccattttctctcgtgcattattgtatgtcatcaagatagtagcagcaac 426
Query: 585 cgaccgagagaacaaaacactgtttcggaatcttctcgtcgtttccgtactgaattttta 644
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 427 cgaccgagagaacaaaacactgtttcggaatcttctcgtcgtttccgtacagaattttta 486
Query: 645 gaagattggccccaaacacctggtgcaccttatttcgatcctagcactccagaaaatgta 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 gaagattggccccaaacacctggtgcaccttatttcgatcctagcactccagaaaatgta 546
Query: 705 accggacttgttggacattctgtcactttactgtgtaaagtgaaaaatttgcaaaatcgc 764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 accggacttgttggacattctgtcactttactgtgtaaagtgaaaaatttgcaaaatcgc 606
Query: 765 acagtgtcatgggtgcgtcatcgagatattcatctactcacggttggtcggtacacatac 824
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 acagtatcatgggtgcgtcatcgagatattcatctactcacggttggtcggtacacatac 666
Query: 825 acttcagaccaacgatttgaagcacaacacaaacctcgttcggaggagtgggcgttaaga 884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 acttcagaccaacgatttgaagcacaacacaaacctcgttcggaggagtgggcgttaaga 726
Query: 885 attcgtagtccacagcgaagagattcaggacaatatgaatgccagatatccactacgcca 944
|| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 727 atccgtagtccacagcgannnnattcaggacaatatgaatgccagatatccactacgcca 786
Query: 945 cctattggtcatgcggtatatctcag 970
||||||||||||||||||||||||||
Sbjct: 787 cctattggtcatgcggtatatctcag 812
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 227,378
Number of extensions: 4920
Number of successful extensions: 4920
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4920
Number of HSP's successfully gapped: 1
Length of query: 1936
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1919
Effective length of database: 8,119,229
Effective search space: 15580800451
Effective search space used: 15580800451
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)