BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16338 (UTR included)
(6061 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3308_C1 944 0.0
>BF14_3308_C1
Length = 972
Score = 944 bits (476), Expect = 0.0
Identities = 492/496 (99%), Gaps = 1/496 (0%)
Strand = Plus / Plus
Query: 4510 ttgtttgtactccggaagaacaaagagagataaacgcgaaaacaaagtctagcgccaaac 4569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 ttgtttgtactccggaagaacaaagagagataaacgcgaaaacaaagtctagcgccaaac 537
Query: 4570 taatggaatccttaatggaaaggaaccgaccaaaaggatgggaagctgcaatctcccaac 4629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 taatggaatccttaatggaaaggaaccgaccaaaaggatgggaagctgcaatctcccaac 597
Query: 4630 ggaataggctacttgaatatgatagaactagcgagcgtcgcactcgtgtgacagacgatg 4689
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 598 ggaataggctacttgaatatgatagaacgagcgagcgtcgcactcgtgtgacagacgatg 657
Query: 4690 acagcgattacttcagcgcgaacagcgtgtggctgagctcaacagagcgagataagctgc 4749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 acagcgattacttcagcgcgaacagcgtgtggctgagctcaacagagcgagataagctgc 717
Query: 4750 aggcgtaccagaagacgctgcacgaaaacaaacacgcttctagacttaacaagaagatga 4809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 aggcgtaccagaagacgctgcacgaaaacaaacacgcttctagacttaacaagaagatga 777
Query: 4810 ccttcgatttcgctggtcgtcaaataatcgaagagaatacaatagaccacgaggtagatg 4869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 ccttcgatttcgctggtcgtcaaataatcgaagagaatacaatagaccacgaggtagatg 837
Query: 4870 aagacaagatcagacaaattactagtaataataaaaataacagtcagttcctggcaccgg 4929
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 838 aagacaagatcagacaaattactagtaataataaaaataacagtcagttcctgacaccgg 897
Query: 4930 atctgttgctcgactcgtcggccgacagagacgtcgcgcccggtgtcaacgcgccattat 4989
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 898 atctattgctcgactcgtcggccgacagagacgtcgcgcccggtgtcaacgcgccattat 957
Query: 4990 taaagttcgatacatc 5005
| ||||||||||||||
Sbjct: 958 t-aagttcgatacatc 972
Score = 153 bits (77), Expect = 4e-36
Identities = 77/77 (100%)
Strand = Plus / Plus
Query: 4440 ggtcgccatcactgtgactgtcaagcttctaaacatgagttggttaataactgtttgcag 4499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ggtcgccatcactgtgactgtcaagcttctaaacatgagttggttaataactgtttgcag 419
Query: 4500 tgcggccgaattgtttg 4516
|||||||||||||||||
Sbjct: 420 tgcggccgaattgtttg 436
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 102,153
Number of extensions: 12385
Number of successful extensions: 12385
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 12384
Number of HSP's successfully gapped: 2
Length of query: 6061
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 6043
Effective length of database: 8,109,745
Effective search space: 49007189035
Effective search space used: 49007189035
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)