BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16340 (UTR included)
(2905 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01016A2F10 1209 0.0
>BF01016A2F10
Length = 832
Score = 1209 bits (610), Expect = 0.0
Identities = 622/626 (99%)
Strand = Plus / Plus
Query: 505 accttctaaagtggaaaaaagtagaaaatgaagcaggatatccttgttacattgatgaaa 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 accttctaaagtggaaaaaagtagaaaatgaagcaggatatccttgttacattgatgaaa 71
Query: 565 ctagcggcaaacaaagttatgaccaccctcaatttagcaaaatcttgaaaaccttggacg 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 ctagcggcaaacaaagttatgaccaccctcaatttagcaaaatcttgaaaaccttggacg 131
Query: 625 agtataatgatattaagtatagtgcttatagaatagcgtttaaaatattcgctcttcaac 684
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 agtataatgatattaagtatagtgcttatagaatagcgtttaaaatattcgctcttcaag 191
Query: 685 ggagccttaaagttccaccactacggataagttctggtgtctttgctcgtcaccagttaa 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 ggagccttaaagttccaccactacggataagttctggtgtctttgctcgtcaccagttaa 251
Query: 745 gtttgtctgaaactagtctttctctcgataccgcagagcttgaagctgtactcgcagaca 804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 gtttgtctgaaactagtctttctctcgataccgcagagcttgaagctgtactcgcagaca 311
Query: 805 tttattttgcagcggaaaaagaaggactgtttactggtgatgtggatttatctgtggatc 864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tttattttgcagcggaaaaagaaggactgtttactggtgatgtggatttatctgtggatc 371
Query: 865 tgttaattaacctattacttaatgtttatgatggagagagaaaatcaccaatccgtgttc 924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tgttaattaacctattacttaatgtttatgatggagagagaaaatcaccaatccgtgttc 431
Query: 925 tagcagccaagactttattaatattacttagtgaggattcaatatcagagaaatggttgg 984
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 tagcagccaagactttattaatattacttagtgaggattcaatatcagagaaatggttgg 491
Query: 985 cattagcaaattgttgtgctgatcataatggttgtgtgtcacggaagagacttgccgcgt 1044
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 492 cattagcaaattgttgtgctgatcataatggttgtgtgtcacggaagagacttgccgctt 551
Query: 1045 tattgatacatgtcactgcattacctaaatacctcggctgccaatgtgattatttagaaa 1104
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 tattgatacatgtcacagcattacctaaatacctcggctgccaatgtgattatttagaaa 611
Query: 1105 atgatgtggataactgctttgaaaag 1130
|||||||||||||||||||||||||
Sbjct: 612 ctgatgtggataactgctttgaaaag 637
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 363,902
Number of extensions: 7897
Number of successful extensions: 7897
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7897
Number of HSP's successfully gapped: 1
Length of query: 2905
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2887
Effective length of database: 8,109,745
Effective search space: 23412833815
Effective search space used: 23412833815
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)