BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16357 (UTR included)
(2392 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2591_C1 589 e-168
BF01028A2F02 311 3e-84
>BF14_2591_C1
Length = 1639
Score = 589 bits (297), Expect = e-168
Identities = 297/297 (100%)
Strand = Plus / Minus
Query: 1570 gcaggcgagtttcgtctcacgtgcgtcgattcctttcgaatcctcgggattgtgaggtcg 1629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1374 gcaggcgagtttcgtctcacgtgcgtcgattcctttcgaatcctcgggattgtgaggtcg 1315
Query: 1630 gctggggacttgtgagctttcctttagctttttctcattttggcggcgtcgggaaggagt 1689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1314 gctggggacttgtgagctttcctttagctttttctcattttggcggcgtcgggaaggagt 1255
Query: 1690 tgactaccgcctgggtactcgccagtacggctgccgctggaacacacaatcttctattaa 1749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1254 tgactaccgcctgggtactcgccagtacggctgccgctggaacacacaatcttctattaa 1195
Query: 1750 actcttcacaacgttacgtccacatcccgttagtattgaagaatgacatctttctattgg 1809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1194 actcttcacaacgttacgtccacatcccgttagtattgaagaatgacatctttctattgg 1135
Query: 1810 gattagttagacgtgtgcggggcttggccgcttatcggccgaatgctatcgggcccc 1866
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1134 gattagttagacgtgtgcggggcttggccgcttatcggccgaatgctatcgggcccc 1078
Score = 77.8 bits (39), Expect = 7e-14
Identities = 39/39 (100%)
Strand = Plus / Minus
Query: 2354 ccagggaatggcggcgggtatatcgggtagccgagtcct 2392
|||||||||||||||||||||||||||||||||||||||
Sbjct: 1079 ccagggaatggcggcgggtatatcgggtagccgagtcct 1041
>BF01028A2F02
Length = 711
Score = 311 bits (157), Expect = 3e-84
Identities = 157/157 (100%)
Strand = Plus / Minus
Query: 1570 gcaggcgagtttcgtctcacgtgcgtcgattcctttcgaatcctcgggattgtgaggtcg 1629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gcaggcgagtttcgtctcacgtgcgtcgattcctttcgaatcctcgggattgtgaggtcg 198
Query: 1630 gctggggacttgtgagctttcctttagctttttctcattttggcggcgtcgggaaggagt 1689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 gctggggacttgtgagctttcctttagctttttctcattttggcggcgtcgggaaggagt 138
Query: 1690 tgactaccgcctgggtactcgccagtacggctgccgc 1726
|||||||||||||||||||||||||||||||||||||
Sbjct: 137 tgactaccgcctgggtactcgccagtacggctgccgc 101
Score = 75.8 bits (38), Expect = 3e-13
Identities = 38/38 (100%)
Strand = Plus / Minus
Query: 2355 cagggaatggcggcgggtatatcgggtagccgagtcct 2392
||||||||||||||||||||||||||||||||||||||
Sbjct: 101 cagggaatggcggcgggtatatcgggtagccgagtcct 64
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 271,660
Number of extensions: 5516
Number of successful extensions: 5516
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5516
Number of HSP's successfully gapped: 4
Length of query: 2392
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2375
Effective length of database: 8,119,229
Effective search space: 19283168875
Effective search space used: 19283168875
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)