BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16363 (UTR included)
(2719 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01052B1D01 1481 0.0
>BF01052B1D01
Length = 754
Score = 1481 bits (747), Expect = 0.0
Identities = 754/755 (99%), Gaps = 1/755 (0%)
Strand = Plus / Plus
Query: 1233 gtacagccaaaccttccacagtatataatcgctctacttaaaattctcttagccgccaca 1292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtacagccaaaccttccacagtatataatcgctctacttaaaattctcttagccgccaca 60
Query: 1293 cccacgtcaacggcgaaaacatactccatgaatataatggctgacgtgttgccagaagag 1352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cccacgtcaacggcgaaaacatactccatgaatataatggctgacgtgttgccagaagag 120
Query: 1353 atgccaatgaccgtgctacaatcactcaaactgggtatagatgttaatagacataaagag 1412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atgccaatgaccgtgctacaatcactcaaactgggtatagatgttaatagacataaagag 180
Query: 1413 atcatagttaaagccgtgaccgccatcctgctgcttctgttgaaacatttcaaattaaat 1472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atcatagttaaagccgtgaccgccatcctgctgcttctgttgaaacatttcaaattaaat 240
Query: 1473 catatatatcaatttgaattcatgtcacagaatctagtattctctaactgcatgcctctc 1532
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 241 catatatatcaatttgaattcatgtcacagaatctagtattctctaactgca-gcctctc 299
Query: 1533 gttttaaaattcttcaaccagaacatcttatcgtatataggagctaagaattcaataccc 1592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gttttaaaattcttcaaccagaacatcttatcgtatataggagctaagaattcaataccc 359
Query: 1593 atatttgatttccccgcttgtgttatcggcgagcaaccggaattgacgagagattgtttg 1652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 atatttgatttccccgcttgtgttatcggcgagcaaccggaattgacgagagattgtttg 419
Query: 1653 gacatcggagactcgtcagtaccatactcgtggaggaacgtgttctcatgcataaacttg 1712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gacatcggagactcgtcagtaccatactcgtggaggaacgtgttctcatgcataaacttg 479
Query: 1713 ttgcgaattctcaacaaactcactaagtggaagaacgctagaatcatgatgcttgtcgta 1772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 ttgcgaattctcaacaaactcactaagtggaagaacgctagaatcatgatgcttgtcgta 539
Query: 1773 tttaagagcgctccgatactaaaacgtacactcaaagtccgtcacgctctcatgcagttc 1832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 tttaagagcgctccgatactaaaacgtacactcaaagtccgtcacgctctcatgcagttc 599
Query: 1833 tatgtattgaagctgctcaaaatgcaaacgagatatttggggcgacagtggaggaagacg 1892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 tatgtattgaagctgctcaaaatgcaaacgagatatttggggcgacagtggaggaagacg 659
Query: 1893 aatatgaagactattagtgccatttactccaaagtccggcatcggttgaacgatgactgg 1952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 aatatgaagactattagtgccatttactccaaagtccggcatcggttgaacgatgactgg 719
Query: 1953 gcgttcggtaacgaggtcgatgctcggccatggga 1987
|||||||||||||||||||||||||||||||||||
Sbjct: 720 gcgttcggtaacgaggtcgatgctcggccatggga 754
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 334,747
Number of extensions: 9257
Number of successful extensions: 9257
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9256
Number of HSP's successfully gapped: 1
Length of query: 2719
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2702
Effective length of database: 8,119,229
Effective search space: 21938156758
Effective search space used: 21938156758
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)