BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16370 (UTR included)
(2014 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01047A2B10 733 0.0
>BF01047A2B10
Length = 822
Score = 733 bits (370), Expect = 0.0
Identities = 370/370 (100%)
Strand = Plus / Plus
Query: 915 atggttcatgcttgctggtggtattacttctcaaaattcactgaattcttcgatacgatc 974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 atggttcatgcttgctggtggtattacttctcaaaattcactgaattcttcgatacgatc 512
Query: 975 ttctttgtgctaagaaagaaattcgatcacgtgtcaaccctccatgtaatacaccacggc 1034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 ttctttgtgctaagaaagaaattcgatcacgtgtcaaccctccatgtaatacaccacggc 572
Query: 1035 gtgatgccgatgtcggtctggttcggtgtcaagttcacacctggcggccattctacgttc 1094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 gtgatgccgatgtcggtctggttcggtgtcaagttcacacctggcggccattctacgttc 632
Query: 1095 ttcggacttttgaatacttttgttcacatcatcatgtatacttactatatgctcgctgcc 1154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 ttcggacttttgaatacttttgttcacatcatcatgtatacttactatatgctcgctgcc 692
Query: 1155 atgggacctcacatgaggaaatacctctggtggaagaaatacctcaccaccttacaaatg 1214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 atgggacctcacatgaggaaatacctctggtggaagaaatacctcaccaccttacaaatg 752
Query: 1215 gtccaatttgttggtatcatggtacatgcgttccagctgttgtttattgagtgtgactat 1274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 gtccaatttgttggtatcatggtacatgcgttccagctgttgtttattgagtgtgactat 812
Query: 1275 cctcgcgcat 1284
||||||||||
Sbjct: 813 cctcgcgcat 822
Score = 684 bits (345), Expect = 0.0
Identities = 345/345 (100%)
Strand = Plus / Plus
Query: 488 agatcacactaaaatggctctaatattgcagtatataaatgatatgcatatatttatgga 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 agatcacactaaaatggctctaatattgcagtatataaatgatatgcatatatttatgga 169
Query: 548 taagtatggagatcctaggacaaatccatggttactcatgagctcaccatttcctacttt 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 taagtatggagatcctaggacaaatccatggttactcatgagctcaccatttcctacttt 229
Query: 608 attgatatgtcttagttatgtttatctagtcaaggttcttgggccacgtttcatggaaaa 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 attgatatgtcttagttatgtttatctagtcaaggttcttgggccacgtttcatggaaaa 289
Query: 668 tagaaaaccttatgaattaaaaaacttattaatagcttataactttttacaagttgtttt 727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 tagaaaaccttatgaattaaaaaacttattaatagcttataactttttacaagttgtttt 349
Query: 728 tagcacatggcttttctatgagagcatgatgggaggctggctgggccattacagttttcg 787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 tagcacatggcttttctatgagagcatgatgggaggctggctgggccattacagttttcg 409
Query: 788 atgtcaaccagtggacagatcaaacaatcctatagctattagaat 832
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 atgtcaaccagtggacagatcaaacaatcctatagctattagaat 454
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 234,538
Number of extensions: 4560
Number of successful extensions: 4560
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4560
Number of HSP's successfully gapped: 2
Length of query: 2014
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1997
Effective length of database: 8,119,229
Effective search space: 16214100313
Effective search space used: 16214100313
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)