BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16373 (UTR included)
(1846 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01011B1E07 1370 0.0
>BF01011B1E07
Length = 789
Score = 1370 bits (691), Expect = 0.0
Identities = 714/722 (98%)
Strand = Plus / Plus
Query: 500 aatgctgagatctttactaatttttttttattacatttctgtcttggatggaaagttaag 559
||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 1 aatgctgagatctttactaatttttttttatnccttttctgtcttggatggaaagttaag 60
Query: 560 tataaaaactccaataagttctaactttttaattcaacaggatgttcgaggatatttatc 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tataaaaactccaataagttctaactttttaattcaacaggatgttcgaggatatttatc 120
Query: 620 agaatatcctgatgagtgttatgatatgttgtatgactttgctcagcatgcatccaattt 679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agaatatcctgatgagtgttatgatatgttgtatgactttgctcagcatgcatccaattt 180
Query: 680 aactttttgttcaatcctcaatgcaagaccaataacgctctgtgaaagatgtgttgagaa 739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aactttttgttcaatcctcaatgcaagaccaataacgctctgtgaaagatgtgttgagaa 240
Query: 740 ttatgtgaaatttcgtgataaatatcacgagttacaacatacacccataaatggaaccac 799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttatgtgaaatttcgtgataaatatcacgagttacaacatacacccataaatggaaccac 300
Query: 800 ttgtatggcattttttggttcacatgatagattaaatgttatacaggagtatcacgacaa 859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttgtatggcattttttggttcacatgatagattaaatgttatacaggagtatcacgacaa 360
Query: 860 tattctgtccatgtgggataaaggaaattgtaatggatgctttgattggattgacggcaa 919
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tattctgtccatgtgggataaaggaaattgtaatggatgctttgattggattgacggcaa 420
Query: 920 accatctcttagaaatgaaactaaacacttccacaaaatatacaatcagacaatggactg 979
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 421 accatctcttagaaatgaaactaaacacttccacaaaatatacaatgagacaatgaactg 480
Query: 980 tatcctaaagaatatgcttgccgaggacagtgatgtatgcaatagatgcatgcagtcata 1039
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tatcgtaaagaatatgcttgccgaggacagtgatgtatgcaatagatgcatgcagtcata 540
Query: 1040 tttgcaattggatggattctataagactttaagtgcagattctattggagttgatagtgt 1099
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 541 tttgcaattggatggattctataagactttaagtgcagattccattggagttgatagtgt 600
Query: 1100 ttgtatggatatagtggattcgatgaatgctaccagatctatatggagtaagactctaaa 1159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgtatggatatagtggattcgatgaatgctaccagatctatatggagtaagactctaaa 660
Query: 1160 ttgctgcaatcttcgaaggactcctgaaatagcatttctatgctgtgctggatttatatc 1219
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ttgctgcaatcttcgaaagactcctgaaatagcatttctatgctgtgctggatttatatc 720
Query: 1220 ct 1221
||
Sbjct: 721 ct 722
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 296,837
Number of extensions: 7733
Number of successful extensions: 7733
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7733
Number of HSP's successfully gapped: 1
Length of query: 1846
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1829
Effective length of database: 8,119,229
Effective search space: 14850069841
Effective search space used: 14850069841
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)