BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16378 (UTR included)
(2698 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01017A2H11 101 6e-21
BF14_729_C2 90 2e-17
BF01025A1D01 88 9e-17
BF01011A1H06 86 3e-16
BF14_729_C3 82 5e-15
BF01024A1H07 80 2e-14
BF01035X1C09 74 1e-12
BF01014A1H02 72 5e-12
BF01005B1E12 72 5e-12
BF01052B1F12 70 2e-11
BF01033B1B03 70 2e-11
BF01012B1C01 70 2e-11
>BF01017A2H11
Length = 713
Score = 101 bits (51), Expect = 6e-21
Identities = 54/55 (98%)
Strand = Plus / Plus
Query: 914 catctcgtctgcccgtgatcacggttgctggaaagtaaccaaaacgtcgggagta 968
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 31 catctcgtctgcccgtgatcacggttgctgaaaagtaaccaaaacgtcgggagta 85
>BF14_729_C2
Length = 1289
Score = 89.7 bits (45), Expect = 2e-17
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 916 tctcgtctgcccgtgatcacggttgctggaaagtaaccaaaacgtcgggagta 968
|||||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 528 tctcgtctgcccgtgatcacggttgctgaaaagtaaccgaaacgtcgggagta 580
>BF01025A1D01
Length = 764
Score = 87.7 bits (44), Expect = 9e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 915 atctcgtctgcccgtgatcacggttgctggaaagtaaccaaaacgtcgggag 966
||||||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 485 atctcgtctgcccgtgatcacggttgctgaaaagtaaccgaaacgtcgggag 434
>BF01011A1H06
Length = 739
Score = 85.7 bits (43), Expect = 3e-16
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 914 catctcgtctgcccgtgatcacggttgctggaaagtaaccaaaacgtcgggagta 968
|||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||
Sbjct: 458 catctcgtctgcccgtgatcacggttactgaaaagtaaccgaaacgtcgggagta 512
>BF14_729_C3
Length = 2041
Score = 81.8 bits (41), Expect = 5e-15
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 917 ctcgtctgcccgtgatcacggttgctggaaagtaaccaaaacgtcggga 965
||||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 1589 ctcgtctgcccgtgatcacggttgctgcaaagtaaccgaaacgtcggga 1637
>BF01024A1H07
Length = 726
Score = 79.8 bits (40), Expect = 2e-14
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 914 catctcgtctgcccgtgatcacggttgctggaaagtaaccaaaacgtc 961
|||||||||||||||||||||||||||||| ||||||||| |||||||
Sbjct: 645 catctcgtctgcccgtgatcacggttgctgaaaagtaaccgaaacgtc 692
>BF01035X1C09
Length = 778
Score = 73.8 bits (37), Expect = 1e-12
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 913 tcatctcgtctgcccgtgatcacggttgctggaaagtaaccaaaacgtcggga 965
||||||||||| ||||||||||||||||||| ||||||||| |||||| ||||
Sbjct: 667 tcatctcgtcttcccgtgatcacggttgctgcaaagtaaccgaaacgttggga 615
>BF01014A1H02
Length = 787
Score = 71.9 bits (36), Expect = 5e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 913 tcatctcgtctgcccgtgatcacggttgctggaaagtaaccaaaacgtcggg 964
||||||||||||||||||||||||||||||| |||| ||| ||||||||||
Sbjct: 251 tcatctcgtctgcccgtgatcacggttgctgtaaaggaacggaaacgtcggg 302
>BF01005B1E12
Length = 657
Score = 71.9 bits (36), Expect = 5e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 914 catctcgtctgcccgtgatcacggttgctggaaagtaaccaaaacgtcggga 965
||||||||||| |||||||||||||||||| ||||||||| |||| ||||||
Sbjct: 301 catctcgtctggccgtgatcacggttgctgcaaagtaaccgaaacctcggga 352
>BF01052B1F12
Length = 785
Score = 69.9 bits (35), Expect = 2e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 914 catctcgtctgcccgtgatcacggttgctggaaagtaaccaaaacgtcgggagta 968
|||||||||||||||||||||||||||||| ||||| ||| ||| |||||||||
Sbjct: 446 catctcgtctgcccgtgatcacggttgctgaaaagtcaccgtaacatcgggagta 392
>BF01033B1B03
Length = 826
Score = 69.9 bits (35), Expect = 2e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 914 catctcgtctgcccgtgatcacggttgctggaaagtaaccaaaacgtcgggagta 968
||||||||||||| ||||||||||||||| ||||||||| ||| ||||||||||
Sbjct: 229 catctcgtctgcctatgatcacggttgctgcaaagtaaccgaaaagtcgggagta 175
>BF01012B1C01
Length = 950
Score = 69.9 bits (35), Expect = 2e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 917 ctcgtctgcccgtgatcacggttgctggaaagtaaccaaaacgtcgggagt 967
|||||||| |||||||||||| ||||| ||||||||| |||||||||||||
Sbjct: 654 ctcgtctgtccgtgatcacggctgctgcaaagtaaccgaaacgtcgggagt 704
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 349,734
Number of extensions: 7524
Number of successful extensions: 7524
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 7524
Number of HSP's successfully gapped: 12
Length of query: 2698
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2681
Effective length of database: 8,119,229
Effective search space: 21767652949
Effective search space used: 21767652949
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)