BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16381 (UTR included)
(1813 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01037A1E11 902 0.0
BF01011B1E07 192 1e-48
>BF01037A1E11
Length = 673
Score = 902 bits (455), Expect = 0.0
Identities = 465/467 (99%), Gaps = 1/467 (0%)
Strand = Plus / Plus
Query: 417 ttagcttattacagaacagtttagccatatatcgtgattattagtacatgttttaataag 476
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttagcttattacagaacaatttagccatatatcgtgattattagtacatgttttaataag 60
Query: 477 aagctaaacaaagaaggcttcgaaatggttgtttcaccgcaaagtcctgccagcgatacc 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagctaaacaaagaaggcttcgaaatggttgtttcaccgcaaagtcctgccagcgatacc 120
Query: 537 caaagcgttcaagctaaaa-aaatcaatatggcctcgaaacaaacatcagttgcagacac 595
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caaagcgttcaagctaaaaaaaatcaatatggcctcgaaacaaacatcagttgcagacac 180
Query: 596 aagagctgaactggcagaattggtgaaacgaaaggcggaagttgctgaaacgttagctaa 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aagagctgaactggcagaattggtgaaacgaaaggcggaagttgctgaaacgttagctaa 240
Query: 656 cttggaaagacaaatttatgcatttgaaggttcctatttggaagatacacaactatatgg 715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cttggaaagacaaatttatgcatttgaaggttcctatttggaagatacacaactatatgg 300
Query: 716 taatatcattagaggctgggatagatatctagccacaaataaaagtacaaactctaaggc 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 taatatcattagaggctgggatagatatctagccacaaataaaagtacaaactctaaggc 360
Query: 776 tgataaaagaaatagaaaattcaaagaggctgaaagattattctcaaagtcttccattac 835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgataaaagaaatagaaaattcaaagaggctgaaagattattctcaaagtcttccattac 420
Query: 836 ttccatggcggctgtaagtggacttgttgatcctgctgaagccaaaa 882
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttccatggcggctgtaagtggacttgttgatcctgctgaagccaaaa 467
>BF01011B1E07
Length = 789
Score = 192 bits (97), Expect = 1e-48
Identities = 100/101 (99%)
Strand = Plus / Minus
Query: 1657 aggatataaatccagcacagcatagaaatgctatttcaggagtccttcgaagattgcagc 1716
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 722 aggatataaatccagcacagcatagaaatgctatttcaggagtctttcgaagattgcagc 663
Query: 1717 aatttagagtcttactccatatagatctggtagcattcatc 1757
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 aatttagagtcttactccatatagatctggtagcattcatc 622
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 292,973
Number of extensions: 6700
Number of successful extensions: 6700
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6699
Number of HSP's successfully gapped: 2
Length of query: 1813
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1796
Effective length of database: 8,119,229
Effective search space: 14582135284
Effective search space used: 14582135284
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)