BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16382 (UTR included)
(1450 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_788_C1 714 0.0
>BF14_788_C1
Length = 920
Score = 714 bits (360), Expect = 0.0
Identities = 387/396 (97%)
Strand = Plus / Plus
Query: 1055 taaatggggtttattaaatttttttataacagaagttaaaaaaatacttgtacacaatat 1114
|||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 54 taaagggggtttattaaatttttttataacagaagttaaaaaaatacttgtacccaatat 113
Query: 1115 atattaccaaactatcaatgtacctgaaattttattctaacaaaaatgtgcgtcacttaa 1174
|||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 114 atattaccaaactatcaatggacctgaaattttattctaacaaaaatgggcgtcacttaa 173
Query: 1175 gcatatataggtaaaatactaatgtccaaccgggctcacactacatatttaaataaataa 1234
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 174 gcatatataggtaaaatactaatggccaaccgggctcacactacatatttaaataaataa 233
Query: 1235 caaaagtaaatgaacagatgataagtactataatcaagagaacaatagaaaattacaaaa 1294
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 234 caaaagtaaatgaacagatgataagtactataatcaagaaaacaatagaaaattacaaaa 293
Query: 1295 taaaaaactaatatcttttaaataaaacaacatttttaaataagaaaaaaataattagga 1354
| |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 294 ttaaaaactaatatcttttaaataaaacaacatttttaaaaaaaaaaaaaataattagga 353
Query: 1355 aaccattttttttaaggctagtatcacacacggaaaacattgcacacattctaataaata 1414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 aaccattttttttaaggctagtatcacacacggaaaacattgcacacattctaataaata 413
Query: 1415 ctgtgcttaaataaattttaatatcattttaaatac 1450
||||||||||||||||||||||||||||||||||||
Sbjct: 414 ctgtgcttaaataaattttaatatcattttaaatac 449
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 275,095
Number of extensions: 6532
Number of successful extensions: 6532
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6532
Number of HSP's successfully gapped: 1
Length of query: 1450
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1433
Effective length of database: 8,119,229
Effective search space: 11634855157
Effective search space used: 11634855157
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)