BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16390 (UTR included)
(1555 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01010A2G07 1350 0.0
BF01040A2G12 100 1e-20
>BF01010A2G07
Length = 720
Score = 1350 bits (681), Expect = 0.0
Identities = 703/712 (98%)
Strand = Plus / Plus
Query: 119 ttgcttaagaaaaaaaagtgctgacgaactggtaaataatgaatggggaacgttaggaat 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 ttgcttaagaaaaaaaagtgctgacgaactggtaaataatgaatggggaacgttaggaat 68
Query: 179 ttgtgactttccttttgttcctattatagatggatcatttttggacgaaatgccgagaaa 238
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 69 ttgtgactttccttttgttcctattatagatggatcatttttggacgaaatgccaagaaa 128
Query: 239 atcattagcccatcaaaactttaagaaaaccaatgttctcatgggatcaaatacagaaga 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atcattagcccatcaaaactttaagaaaaccaatgttctcatgggatcaaatacagaaga 188
Query: 299 gggttattactttattctatactatttgacagaattgttacctaaagaagaaaatgtcgg 358
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 189 gggttattactttattctatactatttgacagaattattacctaaagaagaaaatgtcgg 248
Query: 359 aattactcgagaacaatatttgcaagccgttcgagaattaaatccttttgtgaacgacgt 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 aattactcgagaacaatatttgcaagccgttcgagaattaaatccttttgtgaacgacgt 308
Query: 419 ttcaagacaagctattgtgtatgaatacacagattggcttaatccagatgatccagtaaa 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ttcaagacaagctattgtgtatgaatacacagattggcttaatccagatgatccagtaaa 368
Query: 479 taataaaaattcattagataaaatggtcggtgattaccactttgcttgcggggtcaatga 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 taataaaaattcattagataaaatggtcggtgattaccactttgcttgcggggtcaatga 428
Query: 539 atttgcacatcgctatgcagaaactggtaacaatgtttacacttattattacaaacatcg 598
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 429 atttgcacatcgctatgcagaaactggtaacaatgtttatacttattattacaaacatcg 488
Query: 599 tagtaagaatagtccttggccctcgtggactggggtattacacggagatgaaatcaatta 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 tagtaagaatagtccttggccctcgtggactggggtattacacggagatgaaatcaatta 548
Query: 659 cgtttttggcgagccactcaatcctgggaaaaactattctccggaagaaattgagttcag 718
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 549 cgtttttggcgagccactcaatcctgggaaaaactattctccggannnnnttgagttcag 608
Query: 719 taggcgtttaatgaaatattgggctaattttgcaaaaactggaaatccatcgatggacga 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 taggcgtttaatgaaatattgggctaattttgcaaaaactggaaatccatcgatggacga 668
Query: 779 aaaaggggagacgatgaaagaatattggccgctttatacgactggaggtcgt 830
||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 669 aaaaggggagacgatgaaagaatattggccgctttatacaactggaggtcgt 720
>BF01040A2G12
Length = 764
Score = 99.6 bits (50), Expect = 1e-20
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 1506 ttaataacaaattttagaaatacgtagtcgtaatttcgtcatagtttgta 1555
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 ttaataacaaattttagaaatacgtagtcgtaatttcgtcatagtttgta 58
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 201,941
Number of extensions: 4296
Number of successful extensions: 4296
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4295
Number of HSP's successfully gapped: 2
Length of query: 1555
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1538
Effective length of database: 8,119,229
Effective search space: 12487374202
Effective search space used: 12487374202
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)