BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16396 (UTR included)
(1975 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01052A2B02 1697 0.0
>BF01052A2B02
Length = 880
Score = 1697 bits (856), Expect = 0.0
Identities = 874/880 (99%)
Strand = Plus / Plus
Query: 1090 gtattccagatacttttgcgagtaaagtagcagccattcaagataagcacgcggacgcgt 1149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtattccagatacttttgcgagtaaagtagcagccattcaagataagcacgcggacgcgt 60
Query: 1150 ctgttggcaatgtcactggctcgaatgcagttaacgttttcctgggcatcggagttgcat 1209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgttggcaatgtcactggctcgaatgcagttaacgttttcctgggcatcggagttgcat 120
Query: 1210 ggactgtagctgctgtggtccattggagtaaaaatgaaaaattcattgtagatcccggaa 1269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggactgtagctgctgtggtccattggagtaaaaatgaaaaattcattgtagatcccggaa 180
Query: 1270 atctagccttcagtgtcaccatgttttgctcggaagcagcgcttgctgttctggtattgg 1329
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atctagccttcagtgtcaccttgttttgctcggaagcagcgcttgctgttctggtattgg 240
Query: 1330 tgttgcggagaagaaaatcaattggcggagagttgggaggtccaaaaattaccaaaatta 1389
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 241 tgttgcggagaagaaaatcaattggcggagaattgggaggtccaaaaattaccaaaatta 300
Query: 1390 taacctctatgttctttttctctttgtggttgacttaccttacaatgtcgaccctcgaag 1449
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 301 taacctctatgttctttttctctttgtggttgacttatcttacaatgtcgaccctcgaag 360
Query: 1450 cttacggctacatcaaaggattctagctctttttgtcattgtagtttacattcagatcaa 1509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cttacggctacatcaaaggattctagctctttttgtcattgtagtttacattcagatcaa 420
Query: 1510 atgactacgacatttatatatatacttataagtatttcaacttcaatatttataagtgtg 1569
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 421 atgactacgacatttatatatatacttataagtatttcaacttcaatatttatatgtgtg 480
Query: 1570 tgtagtgataaactaaacaactttaaaaacatataaaattttatctaagcgtaggctcgc 1629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgtagtgataaactaaacaactttaaaaacatataaaattttatctaagcgtaggctcgc 540
Query: 1630 tatcaatcttatataacaagctaaaattgtttagacactcgcaaaattcttaatgcacta 1689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tatcaatcttatataacaagctaaaattgtttagacactcgcaaaattcttaatgcacta 600
Query: 1690 ttgaaaaaaaaaatcctcatttgatctgaattaaaatagtgttgtcctttgacctgtatg 1749
|||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 601 ttgaaaaaaaaaatcctcatttgatctgaattgaaataatgttgtcctttgacctgtatg 660
Query: 1750 ttagcatagaatttaatatattttagattctagacgtttctagcagttgaagtgatgtgc 1809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ttagcatagaatttaatatattttagattctagacgtttctagcagttgaagtgatgtgc 720
Query: 1810 tcaaatgtacaggtttaaaaatccattgtatttcctccttcatctaaatgtttcttctgg 1869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tcaaatgtacaggtttaaaaatccattgtatttcctccttcatctaaatgtttcttctgg 780
Query: 1870 ttctgataaattaagccttgacggctgtggtctaattaccatatatactatgtgttatgt 1929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ttctgataaattaagccttgacggctgtggtctaattaccatatatactatgtgttatgt 840
Query: 1930 gtgtgttataaataatatagcatatatagcggtagttcat 1969
||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gtgtgttataaataatatagcatatatagcggtagttcat 880
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 266,310
Number of extensions: 6140
Number of successful extensions: 6140
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6140
Number of HSP's successfully gapped: 1
Length of query: 1975
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1958
Effective length of database: 8,119,229
Effective search space: 15897450382
Effective search space used: 15897450382
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)