BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16399 (UTR included)
(1963 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01009B1H05 1554 0.0
BF01050A2H04 272 2e-72
>BF01009B1H05
Length = 835
Score = 1554 bits (784), Expect = 0.0
Identities = 796/800 (99%)
Strand = Plus / Plus
Query: 539 gccgactccagattacaacgttgacttagacctgggcgagcctccgccagaactacagga 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36 gccgactccagattacaacgttgacttagacctgggcgagcctccgccagaactacagga 95
Query: 599 gtacgcccgcctccagtgcggcgaggacccgaacacaaaactgcaagctatatacgaact 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 gtacgcccgcctccagtgcggcgaggacccgaacacaaaactgcaagctatatacgaact 155
Query: 659 ccgagatatgatatacgagcggggtgaatgcactccaaaacgcatggacgatgaatacct 718
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 156 ccgagatatgatatacgagcggggtgaatgcactccaaaacgtatggacgatgaatacct 215
Query: 719 gcttaggtttttacgagctcggaattttatcccgcaaagagcgcacagactgatggtgaa 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 gcttaggtttttacgagctcggaattttatcccgcaaagagcgcacagactgatggtgaa 275
Query: 779 ttatcaccagttcaaagaagacaatccagagttattcgagaacgtatatcccctggattt 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 ttatcaccagttcaaagaagacaatccagagttattcgagaacgtatatcccctggattt 335
Query: 839 acggaggattggagacaccaacgtcatggctgtaccgccatatcgtgatcaaaatggtcg 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 acggaggattggagacaccaacgtcatggctgtaccgccatatcgtgatcaaaatggtcg 395
Query: 899 cagacttttgctttatagaattggatcctgggaccccaaatctgttgctgtggaagatat 958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 cagacttttgctttatagaattggatcctgggaccccaaatctgttgctgtggaagatat 455
Query: 959 gctgaaggcgacaatattcgccttggagctcggattgttggagcagcgaacccaaattct 1018
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cctgaaggcgacaatattcgccttggagctcggattgttggagcagcgaacccaaattct 515
Query: 1019 gggtggaatagctttgtttgatttggaagatttaggtacacagcatttgtggcaggtcac 1078
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 516 gggtggaatagctttgtttgatttggaagatttaggtacacaccatttgtggcaggtcac 575
Query: 1079 gccgtcggttgcgagcaaaattattaaacttttagtctcaagttttcccgcaaccactca 1138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 gccgtcggttgcgagcaaaattattaaacttttagtctcaagttttcccgcaaccactca 635
Query: 1139 cgccatacatataattaaccattcttggatattcgataaaatgtacagcatattcaaacc 1198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 cgccatacatataattaaccattcttggatattcgataaaatgtacagcatattcaaacc 695
Query: 1199 gctactgacagcgcaaatgcgctcgagaatcttcttccacggatatgacgtcacatccct 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 gctactgacagcgcaaatgcgctcgagaatcttcttccacggatatgacgtcacatccct 755
Query: 1259 tcacgagcacatccagccggactaccttccggaacggtatggtggtgtatggcccgacta 1318
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 756 tcacgagcacatccagccggactacctcccggaacggtatggtggtgtatggcccgacta 815
Query: 1319 tccgtataccatctggctcg 1338
||||||||||||||||||||
Sbjct: 816 tccgtataccatctggctcg 835
>BF01050A2H04
Length = 805
Score = 272 bits (137), Expect = 2e-72
Identities = 143/145 (98%)
Strand = Plus / Minus
Query: 531 atcggaatgccgactccagattacaacgttgacttagacctgggcgagcctccgccagaa 590
||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 624 atcggaatgccaactccagactacaacgttgacttagacctgggcgagcctccgccagaa 565
Query: 591 ctacaggagtacgcccgcctccagtgcggcgaggacccgaacacaaaactgcaagctata 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ctacaggagtacgcccgcctccagtgcggcgaggacccgaacacaaaactgcaagctata 505
Query: 651 tacgaactccgagatatgatatacg 675
|||||||||||||||||||||||||
Sbjct: 504 tacgaactccgagatatgatatacg 480
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 319,678
Number of extensions: 20585
Number of successful extensions: 20585
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 20585
Number of HSP's successfully gapped: 2
Length of query: 1963
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1946
Effective length of database: 8,119,229
Effective search space: 15800019634
Effective search space used: 15800019634
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)